Geomonas subterranea: KP001_12820
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Entry
KP001_12820 CDS
T07936
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
gsub
Geomonas subterranea
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
AAA_2
HTH_8
AAA
AAA_19
Mg_chelatase
AAA_16
AAA_30
AAA_3
nSTAND3
MCM
AAA_22
bpMoxR
PDE8A_N
FleQ
TIP49
Myosin_head
PIF1
Peripla_BP_4
Glycos_transf_N
UBA_4
Motif
Other DBs
NCBI-ProteinID:
QXE89338
LinkDB
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Position
complement(2957191..2958597)
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AA seq
468 aa
AA seq
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MNILVVDDESVIREGLARILEGDSFTVDAAKNGHAAIELLQQKQFELIITDLKMPGMSGF
EVLNAVKILQPDTPVIMITGFATVETAVEAMKNGTVDYIVKPFTPEQILEKVHLALEQKK
TSVEDIVVKKEIDCHHGFDEFVGESREMQKVYRRIIQVASTDSTVLITGESGTGKELAAR
AIHKHSSRRDQPFVAVDCTALAENLLESELFGHVKGSFTGAVQTKMGLLMVADGGTLFLD
EVSNISLATQAKLLRVLQERQVTPIGGTQPVSFNIHLVAATNRNLKTMVAEGKFREDLFF
RLNIIPLELPPLRERKGDIPLLIRHFMNKFVEEVGKDLRGISPEAMQFLENYSYPGNVRE
LVNTIERAVVLCEGDVIQKENLELGEPAEAPGTGFDGFVPTSAEALKEMKRHIRDRSVEN
VEKAFVIQALKRNNWNISRAAEETGMLRPNFQTMLKRLGISVKDYFGR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaatattctagtggtcgatgatgagtctgttatcagggaggggctggccaggattctt
gaaggagattccttcaccgtagatgctgccaagaacgggcacgctgccatagagcttttg
cagcagaaacagttcgagctgatcatcacggacctcaagatgccgggcatgagcggcttc
gaggtgctgaacgcggtaaagatcctgcagccggacactccggtgatcatgatcacgggc
tttgccacggtggagaccgccgtcgaggcgatgaaaaacggcaccgtcgactacatcgtc
aagcccttcaccccggaacagatcctcgagaaggtccacctggcgctggagcagaagaag
acctcggtggaagacatcgtggtgaagaaggagatcgactgccaccacggcttcgacgag
ttcgtcggggaaagccgggagatgcagaaggtttaccgccgcatcatccaggtcgcttcc
accgacagcacggtacttatcaccggcgaaagcggtaccggcaaggagcttgccgcgcgc
gccattcacaagcacagttccaggcgcgaccagcccttcgtggccgtcgactgcaccgcg
ctggcagaaaacctccttgagagcgagctcttcggccatgtcaaaggttccttcacgggt
gcggtccagaccaagatggggcttttgatggtcgccgacggggggacgctctttctcgac
gaggtctccaacatcagcctcgccacccaggccaagctcctgcgcgtactgcaggagcgg
caggtcactcccatcggcggcacccagccggtctccttcaacatccacctcgtggccgcc
accaaccggaacctgaagaccatggtggcggagggcaaattcagggaagacctctttttc
cgtctcaacatcatccctttggagctccccccgctgcgcgaacgcaagggtgacatcccg
ctgctgatccggcacttcatgaacaagttcgtcgaggaagtggggaaggacctgcgcggc
atctccccggaggcgatgcagttcctggaaaattactcctatcccgggaacgtgcgggaa
ctggtgaataccatcgagcgcgccgtggttctatgtgagggggatgtgattcagaaggag
aaccttgagcttggcgagccggcggaggccccgggcaccgggttcgacggcttcgtcccg
accagcgccgaggccctcaaggagatgaagcgccacatccgcgaccgctcggtcgaaaac
gtcgagaaggccttcgtcatccaggccttgaaacgcaataactggaacatctcccgggcc
gccgaggaaaccggcatgttgcgccccaatttccagaccatgctgaagcgtctggggatt
tcagttaaggactacttcggccgatag
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