Geomonas subterranea: KP001_13355
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Entry
KP001_13355 CDS
T07936
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
gsub
Geomonas subterranea
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsub03021
]
KP001_13355 (rpoH)
Transcription machinery [BR:
gsub03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KP001_13355 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
HTH_11
HTH_17
UCR_14kD
GntR
SecM_small
HTH_25
RskA_N
Motif
Other DBs
NCBI-ProteinID:
QXE89437
LinkDB
All DBs
Position
complement(3064659..3065510)
Genome browser
AA seq
283 aa
AA seq
DB search
MTHAMPVPIDSLTLYLTEINRFPLLSADEEMDLACRFRDEGDLEAAHKLITSNLRFVVKI
AGEYRSYGMKMLDLIQEGNVGLMMAVRKFDPAKGVRLISYAVWWIRAYIQNHIISAWSLL
KIGTTQAQRKLFFKLNQAKQAIINMTGEGDLHAAAISLDVKDAEAQEMEQRLRGELSLDV
EMFEGEGATFLESLPDLRQNQEEMLAERQETTILEQTVASALENLNEKERFVIERRVAAD
QPLTLQEIADHFSISRERVRQIEEGALKKMKRFLTPLVVDQAA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacgcaatgccggtacctatagacagccttaccctgtacctcacggaaatcaac
cgttttccgcttctgtcggcggatgaggagatggatctggcctgcaggtttcgggacgag
ggggacctggaggcggctcacaagctgatcacctccaacctcaggttcgtcgtgaagatc
gccggggagtaccgctcctacggcatgaagatgctggacctgatccaggaggggaacgtc
ggcctgatgatggccgtcaggaagttcgatcccgccaagggggtacgtctcatctcgtat
gccgtgtggtggatcagggcgtacatccagaatcacatcatctccgcctggagccttttg
aagatcggcaccacccaggcgcagaggaagctcttcttcaagctgaaccaggccaagcag
gcgattatcaacatgaccggcgaaggggacctgcatgccgcggccatctcgctggacgtg
aaggatgccgaggcgcaggagatggaacagcgcctgaggggcgaactctcgctggacgtg
gagatgttcgaaggggagggggcgaccttcctcgagagcctccccgacctgcgccagaac
caggaggaaatgctggccgagcgccaggagaccaccatcctggagcagaccgtggcgagc
gcgctcgagaacctgaacgagaaggagcgcttcgtcatcgagcgccgggttgcggccgac
cagccgctcaccctgcaggagatagccgaccacttctccatctcccgggagcgggtgcgc
cagatcgaggaaggggcgctcaagaagatgaagcgcttcctgaccccgctggtcgtggat
caggcggcttaa
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