Geomonas subterranea: KP001_13775
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Entry
KP001_13775 CDS
T07936
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gsub
Geomonas subterranea
Pathway
gsub03030
DNA replication
gsub03430
Mismatch repair
gsub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KP001_13775
03430 Mismatch repair
KP001_13775
03440 Homologous recombination
KP001_13775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsub03032
]
KP001_13775
03400 DNA repair and recombination proteins [BR:
gsub03400
]
KP001_13775
Enzymes [BR:
gsub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KP001_13775
DNA replication proteins [BR:
gsub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KP001_13775
DNA repair and recombination proteins [BR:
gsub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KP001_13775
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
PALP
Motif
Other DBs
NCBI-ProteinID:
QXE89509
UniProt:
A0ABX8LDL8
LinkDB
All DBs
Position
3159269..3162412
Genome browser
AA seq
1047 aa
AA seq
DB search
MFVHLHVHSSLSPNWGVHSPEALCAEAARLGFDTLALTDRNGLYGVPRFLDAAREAGISP
IIGTEAVTEQNRAVLLAADQEGYANISRLLSDLHCDNSFDLCQALSRYRHGVIVVSDDRR
LLSALKRVSEDGLFVELSPGHDMHSALALSRELRLPAVATARAVLRAARCAPGSHAADTL
TPTLSQGEREDGDESHHVVQGTGVKGTGTWRSQSPLRGDIGDFHLHRVLRAIHLNTKLSR
LTPDLTASESDVLFSPNQMAEFFPHCPEALQNSLRIATMCRRDWDLSTTIFPAFRGLGND
DAFETLNQRAREGALWRYGSIAPDVEARLAKELAIIRDKGFAHYFLVVEEITRQSQRTCG
RGSAAASLVAYCLGITHVDPIRHNLFFERFLNEGRSDPPDIDVDFPWDERDAILDFAFAR
YGARRAAMVANQVGFKGRSALREVAKVYGLPDFEIKEMTERISGFWRAEQSAAAMSGHPL
FQGETLSRDWQEIVATARHLNGQLRHLSLHCGGLVIVPDEIRRYVPVEISHKGLPLIQWE
KDQAEDAGLVKIDILGNRSLAVIRDAMAAVKEQTGIEIDYASWRPLDDGRTQSLMRRGLT
IGCFYLESPSVRLLLRKIWSSTAPPETFAIDLFEVLVQASSIIRPAANSFIQEYVARMQG
KKWSHLHPLLEPVLGETLGIAIYQEQITQIAMELAGFSASEGDLLRKVITKKHREKRLAD
FRAKFIAGGKERGVTEPVLDAIWEQILSFAGYSFCKPHSASYALLSAKAAYMKANHPAQF
IAAVISNQGGYYSPFAYLSEGRRLGLTILPPDINESDYHYTGFEKTLRIGLMQIDGLTRE
GAQRLLKERREGAFTSFQDFLRRASVQRADAERLVKAGCFDAVEGEQRRPALLWELLHFQ
QQATALLFEQKTELPTPPPYDAETVLRQEVEALGFLASRHPLTLYKAQWQRHRPIKASEL
IKHSGKWVTMVGWWITTKTVEDKHGRPMEFVSFEDVTAIFDATFFPDIYARFCRKLSQRR
PYLIKGVVEEEFGVATIRVKWVGFLDG
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtccatctccacgtacattcatccctctctcccaactggggcgtccactcgccg
gaggcgctgtgcgcggaggcggcgcgccttggcttcgatacgctcgctctcacggaccgc
aacgggctttacggggtgccacgctttctcgacgcggcgcgcgaggcgggcatctccccc
atcatcggcacggaggcggtgacggaacaaaatcgcgcggtgctgctcgcggctgaccag
gaggggtacgccaacatctcgcgcctcctctcggacctccactgcgacaactctttcgac
ctctgccaagcgctctcccgctaccggcacggcgtaatcgtcgtgagcgacgaccggcgc
ctgctatctgcgttgaagcgggtatcggaggatgggcttttcgtggaactgtcgcctgga
cacgacatgcacagcgcactggcgctgtcgcgggaactgcggctgccggcggtggcgacg
gcgagggctgtccttcgcgctgcgcgctgcgcaccagggtcccatgcggccgacaccctc
accccgaccctctcccagggggagagggaggatggggacgagtcccatcacgtggttcag
ggaacaggggtaaaggggacaggcacctggcggagccagtcccctttacggggggatatc
ggcgacttccacttgcaccgggtgctgcgggccattcacctcaacacgaaactgtcccga
ctgacgccggacctgacggcatcggagtcggatgtgctcttctctccgaaccagatggcg
gagttcttcccgcactgcccggaggcgctccagaactcgctgcgcatcgctaccatgtgc
cgccgggattgggacctctccaccaccatcttccccgccttccgcgggctgggcaacgac
gacgccttcgagacgctcaaccagcgcgcgcgggagggggccctctggcgctacgggtcc
atcgcgcccgacgtggaggcgcgcctcgccaaggaactcgccatcatccgcgacaagggg
ttcgcccactacttcctggtggtggaggagatcacccggcagtcccagcgcacctgcggc
agggggagcgcggcggcgtcgctggtcgcctactgcctcggcatcacccacgtcgatccc
atccgccacaacctcttcttcgaacgattcctgaacgagggacgcagcgaccctcccgac
atcgacgtggactttccctgggatgaacgcgacgccatcctcgacttcgccttcgcccgc
tacggcgcgagacgcgcggcgatggtggcgaaccaggtggggttcaaggggaggtcggcc
ctgcgcgaggtggccaaggtctacgggctgcccgacttcgagatcaaggagatgacggaa
cgcatctccggtttctggcgcgcggaacaaagcgcggccgcgatgtccgggcacccgctg
ttccagggggagacgctctcgcgtgactggcaggagatcgtcgccacggcgcgccacctg
aacggtcagttgcgccacctctcgctgcactgcggggggctcgtcatcgtccccgacgag
atccgcaggtacgttccggtggagatttcgcacaaggggctccccctgatccagtgggag
aaggaccaggccgaggacgcagggctggtgaagatcgacatcctcgggaaccgatcgctc
gcggtgatccgggacgcaatggccgcggtgaaggaacagacagggatcgaaatcgactac
gcgagctggcgccccctggatgacggccggacccagagcctgatgcgccggggactcacc
atcggctgcttttaccttgaatccccctcggtgcgcctgctgctaagaaagatctggagt
tcgacggcgccgccggagaccttcgccatcgacctcttcgaggtgctggtgcaggcgtcc
tcgatcatccgtcccgccgccaacagtttcatccaggagtacgtggccaggatgcagggt
aagaaatggtcgcacctgcacccgctgctggaaccggtcctcggggagacgcttggcatc
gccatctaccaggaacagatcacgcagatcgccatggaactggccggtttctctgccagc
gaaggggacctgctcaggaaggtgatcaccaagaagcaccgggagaagagacttgccgat
ttccgggccaagttcatcgcgggaggaaaggagcggggcgtcacggaaccggtgctggac
gcgatctgggagcagatcctctccttcgccggatattccttctgcaagccgcactcggcg
agctacgccctgttgagtgccaaggcggcctacatgaaggcgaaccaccccgcgcagttc
atcgcggcggtcatctccaaccagggggggtattactcgccattcgcctacctatcggag
gggcgcaggctggggctcaccatactgccgccggacatcaacgagagcgactaccactac
acgggcttcgagaaaacgctgcggatcgggttgatgcagatcgacgggctgacccgggag
ggggcgcagcggctcctcaaggagcgccgggagggggccttcacgtcgttccaggatttc
ctgcgccgggccagcgtacagcgggcggacgcggagcggctggtgaaggcgggatgcttc
gacgcagtggagggggaacaaaggcgaccagcgctcttgtgggaactgctccatttccag
cagcaggcgacggcgctccttttcgaacagaaaaccgagctccccacgccacccccctac
gacgcggagacggtcttgaggcaggaagtggaggcgctcggcttcctggcctcgcggcac
ccgctcaccttgtacaaggcacagtggcagaggcacaggcccatcaaggcgtcggagctg
atcaaacattcggggaagtgggtgaccatggtgggatggtggatcacgaccaagacggtg
gaagacaagcacggccgccccatggagttcgtgtcgttcgaggacgtgacggcgatcttc
gacgccacgtttttcccggacatctatgcccgcttttgccgcaagctgtcgcagcgccgt
ccctacctcataaaaggggtggtcgaggaggagttcggcgtggccaccatcagggtgaaa
tgggtcggtttcctggacggttga
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integrated database retrieval system
