KEGG   Geomonas subterranea: KP001_13800
Entry
KP001_13800       CDS       T07936                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
gsub  Geomonas subterranea
Pathway
gsub00470  D-Amino acid metabolism
gsub00550  Peptidoglycan biosynthesis
gsub01100  Metabolic pathways
gsub01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:gsub00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    KP001_13800
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    KP001_13800
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    KP001_13800
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:gsub01011]
    KP001_13800
Enzymes [BR:gsub01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     KP001_13800
Peptidoglycan biosynthesis and degradation proteins [BR:gsub01011]
 Precursor biosynthesis
  Amino acid ligase
   KP001_13800
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 CPSase_L_D2 ATP-grasp_3 ATP-grasp GARS_A TTL
Other DBs
NCBI-ProteinID: QXE89514
UniProt: A0ABX8LGP9
LinkDB
Position
complement(3168324..3169241)
AA seq 305 aa
MTVQELKTKKIAVLMGGLSAEREVSLNSGKAVLASLTRQGYDAVGIDVGRDLAQRLAGEK
VELAFIALHGRFGEDGSVQGLLELMAIPYTGSGVLASALAIDKIAAKVMFAAAGLKLAPY
QVLRRGEELKLENPLPVVVKPSKEGSSVGVSIVKEPGQMAKALKEAFRYDSEILVEAFIS
GKEVQVGILDGRAMGAIEIVPKNEFYDYEAKYTDGGAEHILPARLPENVYRAVLKEGEKA
HAALGCDCYSRVDFLVNEAGECYLLEVNTLPGMTDLSLLPEIARGSDIDFDQLVVRILLA
ASLKI
NT seq 918 nt   +upstreamnt  +downstreamnt
atgaccgtacaggagctgaaaaccaagaagatcgccgtgctgatggggggactttccgca
gagcgcgaggtgtcccttaacagcggcaaggcggtgctcgcctcgctcacgcgccagggg
tacgacgccgtcggcatcgacgtcgggcgcgacctggcccagcgactggccggggagaag
gtggagttagccttcatcgccctgcacggccgcttcggtgaggacggttccgtccagggg
ctcctggaactgatggctatcccctacaccggttccggggtcctcgcctccgcccttgcc
atagacaagatcgccgccaaggtgatgtttgccgccgccgggctgaagctcgccccctac
caggtgctgcgccgcggcgaggagctgaagctcgagaaccccctcccggtggtggtgaag
ccctccaaggaaggctcttcggtgggcgtcagcatcgtgaaggagcccgggcagatggca
aaggcgctcaaggaggccttccgctacgactccgagatcctggtcgaggcgttcatcagc
ggcaaggaagtccaggtcggcatcctcgacggacgcgccatgggcgccatcgagatcgtc
ccgaagaacgagttctacgactacgaggcgaagtacaccgacgggggcgccgagcacatc
ctcccggcccgcctgccggagaacgtctaccgtgcggtcttgaaggaaggggagaaggcg
catgccgccctggggtgcgactgctacagccgcgtcgatttcctcgtgaacgaggcggga
gagtgctaccttctcgaggtgaacaccctgccgggcatgacggacctgagcctgctgccg
gagatcgcccgcggatcggacatcgatttcgatcaactggtggtgcgcatcctcctggcc
gcatcgctcaagatctga

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