Geomonas subterranea: KP001_13825
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Entry
KP001_13825 CDS
T07936
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
gsub
Geomonas subterranea
Pathway
gsub00470
D-Amino acid metabolism
gsub00550
Peptidoglycan biosynthesis
gsub01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KP001_13825 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KP001_13825 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gsub01011
]
KP001_13825 (murD)
Enzymes [BR:
gsub01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
KP001_13825 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
gsub01011
]
Precursor biosynthesis
Amino acid ligase
KP001_13825 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Peptidase_S32
Motif
Other DBs
NCBI-ProteinID:
QXE89518
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All DBs
Position
complement(3173967..3175328)
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AA seq
453 aa
AA seq
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MELKDKKILVVGLAKTGVAVTRFLAERGALVTVTDMRDDEALADVLAELSDLDLCLELGR
HVPYSFLMADLIVVSPGVPMDIKPLEMARAQKRRVVSEVELASWFIEAPMVAITGTNGKT
TTTTLTGEIFKGCGFDTFVGGNIGNPLIELAMSGERVERVVVELSSFQLEGVESFRPHVA
VLLNLTEDHLDRYHSFQEYIDAKLRIFENQGPEDFAVLNIDDPLVAACASKLKARLFPMS
RFHELEEGISYRDGFITFAHDGKVLRFGTDGFKLKGVHNLDNIMASMASTLLMRCDGDCA
YATVKHFKGLPHRMEFVEEVNGVAYYEDSKGTNVGSVVKSLESFDSGITLIAGGKDKGGS
YEPLAQLVSQRVSHLVLIGEARERMHQALGDLTDTHFADTLEEAVETARRLTRPGGVVLF
SPACSSFDMFKNYEERAERFKAAVRAAKEAEKK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaaggacaagaaaatactggtggtggggctggcgaagaccggcgtcgccgtg
acccgcttcctggcggagcgcggggcgctcgtcacggtcaccgacatgcgtgatgacgag
gcgcttgcggacgtcctggcggaactctccgatctcgacctctgcctggaactcggccgt
cacgtcccctacagcttcctgatggcggacctgatcgtggtctcccccggcgtccccatg
gacatcaaaccgctggagatggcgcgggcccagaagcgccgcgtggtaagcgaggtggaa
ctcgcctcctggttcatcgaagcccccatggtcgccatcaccggcaccaacggcaagacc
accacgaccaccctgaccggagagatcttcaaggggtgcggcttcgacaccttcgtcggc
ggcaacatcggcaatcccctcatcgaactcgccatgagcggcgagcgggtggagcgcgtc
gtggtcgaactctcctccttccaacttgagggagtcgagagcttccgcccccacgtcgct
gtgcttttgaacctgaccgaggaccacctggaccgctaccacagcttccaggagtacatc
gacgccaagctgcgcatcttcgagaaccagggacccgaggacttcgcggtcctgaacatc
gacgacccgctggtggccgcctgcgcctcgaagctgaaggcgcgcctcttcccgatgagc
cgcttccacgagctggaagaggggatcagctaccgtgacggattcatcaccttcgcccac
gacggcaaggtgctccgcttcgggaccgacggcttcaagctgaagggggtgcacaacctg
gacaacatcatggccagcatggcgtccacgctcctcatgcgctgcgacggcgactgcgcc
tacgccacggtcaagcatttcaaggggctgccgcaccgcatggagttcgtcgaggaagtg
aacggtgtcgcctactacgaggacagcaaggggaccaacgtcggcagcgtggtcaagtcc
ctggaaagcttcgactccggcatcaccctcatcgccgggggcaaggacaaggggggctcc
tacgagccgctggcccagctcgtatcccaacgggtcagccacctggtcctgatcggcgag
gcgcgggagcggatgcaccaggcgctgggcgatctcaccgatacccacttcgccgacacg
ctggaggaggcggtcgagaccgcccgcaggctgacccggcccggcggcgtggtcctcttc
tcgccggcctgttccagcttcgacatgttcaagaactacgaggagcgcgcggagcgcttc
aaggcggcggtacgcgcggccaaggaggctgagaagaagtga
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