Geomonas subterranea: KP001_13905
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Entry
KP001_13905 CDS
T07936
Name
(GenBank) outer membrane protein assembly factor BamD
KO
K05807
outer membrane protein assembly factor BamD
Organism
gsub
Geomonas subterranea
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsub02000
]
KP001_13905
Transporters [BR:
gsub02000
]
Other transporters
Pores ion channels [TC:
1
]
KP001_13905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YfiO
TPR_18
TPR_6
TPR_16
TPR_14
TPR_2
TPR_12
TPR_19
ANAPC3
DHR-2_Lobe_A
TPR_21
Motif
Other DBs
NCBI-ProteinID:
QXE89531
LinkDB
All DBs
Position
complement(3190579..3191370)
Genome browser
AA seq
263 aa
AA seq
DB search
MHSRPLRYLGLSTLLTLLGACATAPAPVKGPETYFKEGEAAYASRHFEDAIAQFKKVKES
YSNPELTAQAELKIADAHFENGAFIEAAAAYEDFRKLHPSNEKAPYALYRLGLANYNQIT
GIDTDQTAVKNSVHYLEMFLAQYPGSEYTEDAKAKLADCRAKELAYENYVGNFYLRTKKY
PSAIKRLSEALQRFPGEPGLADTLFYLQQAYLKSGDTARAEEVAKRLETEYPAKAREAKG
EEPKGEGAKPAAGKDELPMIIFK
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcactctcgacccctgcgttacctgggcctttccaccctgcttaccctgctgggcgcc
tgcgccacggcccccgctccggtaaagggccctgagacctacttcaaggaaggcgaggcc
gcctacgcctcccggcacttcgaggacgccatcgcgcagttcaagaaggtgaaggagagc
tacagcaatcccgaactgaccgcgcaggccgagctgaagatcgcggatgcccatttcgag
aacggcgccttcatcgaggcggccgccgcctacgaggacttccgcaagctccaccccagt
aacgagaaggccccttacgcgctgtaccgcctggggcttgccaactacaaccagatcacc
ggcatcgacaccgaccagacggcggtcaagaattcggtgcactacctggagatgttcctg
gcccagtatcctggctcggagtacacggaggacgccaaggcgaagctcgccgactgccgc
gccaaggaactcgcctacgaaaactacgtcgggaacttctacctgaggaccaagaagtac
ccttcggccatcaagcgtctgagcgaggcgctgcagcgcttccccggcgaaccggggctc
gcggacacccttttctacctgcagcaggcctacctgaagtccggggacacggcgcgtgcc
gaagaggtggcgaaaaggctcgagacggaatatccggccaaggcgcgcgaggcgaagggt
gaggagccgaaaggggagggggcgaagccggccgcaggcaaggacgagcttcccatgatc
atcttcaagtag
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