Geomonas subterranea: KP001_13920
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Entry
KP001_13920 CDS
T07936
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
gsub
Geomonas subterranea
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gsub01011
]
KP001_13920
Enzymes [BR:
gsub01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
KP001_13920
Peptidoglycan biosynthesis and degradation proteins [BR:
gsub01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
KP001_13920
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM1_NFP_LYK
LysM3_LYK4_5
LysM_RLK
LysM3_NFP
HTH_28
SLT_2
Motif
Other DBs
NCBI-ProteinID:
QXE89534
UniProt:
A0ABX8LFS1
LinkDB
All DBs
Position
complement(3194145..3195650)
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AA seq
501 aa
AA seq
DB search
MIKVTVVILALLTPCLALAAPGELFHDSGRKETQTQQLASADLALSKGLGLTSADFPGND
DVDADPDDFELKLPEMELPESDIPLTFNSKVEYFTRYFQGSGRGFFAKWLSRSERYIPMM
KTVLKKEGLPEDLVYLAMIESGFIPHAVSVASAVGPWQFMPATGKRYALRIDPWIDERRD
PLKATVAAALYLKELYALFNNDWYLAAAGYNAGENKILRAINMYNTRDFWEISKGSYLAR
ETKDYVPKLLAAAIIAKEPAKFGFADVAYLPPIEFDQVPVPSRTDLDVMAKACGVPLQNI
KELNPELRRATTPPDYPGYQLKVPKGAGTTCAAEYAKIPESERYVERVRNVQYRAKKRDT
LASIARRFNTSQQTIAELNNIGKKKVKLAGRVLTIPVQVASARGEAHPAAEAKVEPKAEA
KAETRTATQVAKAEAELQEFHKYYTVKKGDTLASLAKRFNVTARLLSAWNNLKTRVALKP
GKRIIVAKYQEKKGALVKDEG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagttaccgttgtcatacttgcacttctgaccccctgcctcgccctcgcggcg
cccggagagctctttcacgattccggacgcaaggaaacccagactcagcagctcgcttct
gccgacctcgctctttcaaaggggctcggccttacctccgccgacttccccggcaacgac
gacgtcgacgccgatccggacgacttcgaattgaagttgccggagatggagttgccggaa
tccgacatcccccttaccttcaattccaaggttgagtacttcacccgctacttccaggga
tccggccgcggcttcttcgccaagtggctctccaggagcgagcgctacatcccgatgatg
aagacggtgctgaagaaggaagggctcccggaagacctggtctacctcgccatgatcgag
agcgggttcataccgcacgccgtctcggtggcgagcgccgtcggcccctggcagttcatg
cccgcgaccggcaagcgctacgcgctcaggatcgacccctggatcgacgaaaggcgcgat
ccgctgaaggcgaccgtcgccgcggcgctttatctcaaagagctgtacgcgcttttcaac
aacgactggtacctggccgcggcggggtataacgccggcgagaacaagatcctgcgtgcc
atcaacatgtacaatacccgcgatttctgggagatctccaaggggagctacctggcgcgc
gagaccaaggactacgtccccaagctcctcgccgccgcgatcatcgccaaggaaccggcc
aagttcggcttcgcggacgtcgcttacctcccgccgatcgagttcgaccaggtgcctgtc
ccgtcccgcaccgacctggacgtgatggcaaaggcctgcggcgttcccctgcagaatatc
aaggagttgaacccggagctgcgccgcgccacgactccgccggactacccggggtaccag
ttgaaggtgcccaaaggggccggcaccacctgcgccgccgaatacgccaagatccccgag
tcggagcgttacgtcgagcgggtcaggaacgtgcagtaccgcgccaagaagcgtgacacc
ctggcctccatcgcccggcgcttcaacaccagccagcagaccatcgccgaactgaacaac
attggcaagaagaaggtgaagcttgccggccgcgtgctcaccatcccggtccaggtggcg
tcggcgcgtggcgaggcccatccggcggcggaagcgaaggtggaacccaaggcggaagca
aaggccgagaccaggaccgcgacccaggtggccaaggccgaggcggagctccaggagttc
cacaagtactacaccgtcaaaaagggggataccctcgcctccctcgccaagaggttcaac
gtaacggccaggctcctctccgcctggaacaacctgaagacccgggtggccctgaagccc
ggcaagcgcatcatcgtcgccaagtaccaggagaagaagggcgccctggtcaaggacgaa
ggctaa
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