Geomonas subterranea: KP001_14225
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Entry
KP001_14225 CDS
T07936
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
gsub
Geomonas subterranea
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsub03016
]
KP001_14225
Enzymes [BR:
gsub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
KP001_14225
Transfer RNA biogenesis [BR:
gsub03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
KP001_14225
Prokaryotic type
KP001_14225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Gal_GalNac_35kD
Motif
Other DBs
NCBI-ProteinID:
QXE89590
LinkDB
All DBs
Position
complement(3278090..3279169)
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AA seq
359 aa
AA seq
DB search
MPKPFRYLEPTFFAGLFDDPLLLVRVRPTGRALLFDCGKMHHLAKRVYTSIDAIFISHAH
MDHFMGMDSVIRHSHASPRTIDVFGPPGLAGRMANKFACYDWNLADTFWGNFRVNEVGAN
GRVTSTLYNGPEAFAATSEGERNGVLYGNRHLTVTATQCEHHIPVMAYRIDEGAAFVLDD
HRMAVEGVRKGAWLKDMEKLFHDGVMERNPVRYPCEIGGSVEERLEPDAAALYQRIRKFE
EPASIGYVTDVGYSGENLEQLAGLLEGVTLLVCECAFLASEQKKAELSRHLCTTQFNKLL
ERLRPRYVLPMHFSKTYQRGSAPLYEEIEPPPGVTVLKIPDRLTPRPIMEGEVPRPVEL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacctttccgctacctcgaacccaccttcttcgcgggtctcttcgacgacccg
ctgctcctggtccgggtacgtcccaccggacgtgcgctcctcttcgattgcggcaagatg
catcacctcgccaagagagtctacacctccatcgacgccatcttcataagccacgcccac
atggaccatttcatggggatggatagcgtgatccgccacagtcacgcctcgccacgcacc
atcgacgtgttcggcccccccggccttgccggccgcatggccaacaagttcgcctgctac
gactggaacctcgccgacaccttctggggtaacttccgtgtcaacgaggtcggggcaaac
ggccgggtcaccagcaccctgtacaacggcccggaagcctttgccgccacttccgaggga
gagcgtaacggcgtgctctacggcaaccggcacctgaccgtcaccgccacgcagtgcgag
caccacatcccggtgatggcctaccggatagacgagggtgccgcattcgtgctcgacgac
catcgcatggccgtagagggggtgcggaagggggcctggctgaaggatatggagaagctg
ttccacgacggcgtgatggagaggaacccggtccgctacccgtgcgagatcggagggagc
gtggaggagaggctggagccggatgcggccgccctgtaccagcgcatcaggaagtttgaa
gagccggccagcatcggctatgtgactgacgtcgggtactccggggagaacctggagcaa
ttggcgggcctgttggaaggagtgaccctgctggtgtgcgagtgcgcattcctggcgtcc
gaacagaagaaggcggagctgtcccgtcatctctgcaccacgcagttcaacaagctgctg
gagcgcttgcgtcccaggtacgtgctgccgatgcacttctcgaagacctaccagagaggg
agtgcgccgctatatgaggagatcgagccgccgcccggcgtcaccgttttgaagatcccc
gatcgattgaccccgcgtcccatcatggaaggcgaggtgccgcggccggtagagctatga
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