Geomonas subterranea: KP001_14380
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Entry
KP001_14380 CDS
T07936
Name
(GenBank) outer membrane beta-barrel domain-containing protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
gsub
Geomonas subterranea
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsub02000
]
KP001_14380
Transporters [BR:
gsub02000
]
Other transporters
Pores ion channels [TC:
1
]
KP001_14380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OprF
Opacity
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
QXE89621
UniProt:
A0ABX8LE68
LinkDB
All DBs
Position
complement(3308236..3309615)
Genome browser
AA seq
459 aa
AA seq
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MKKYLLLLVLVPALLFTLLPQAHAEIKAQSFSLSPFVGGYTFIGKEHLETAPAFGLRGGY
NFTRHFGLEAVFDYVPTEGKRNSNIGDLDAYNYHLDMLYHFMPDRQLVPYVAAGYGGQSR
EASGPFETTRSAFNYGAGVKYFLTEAMALRGDLRHLILREDGESFHNLEYSVGLDFVFGG
VKEAPAAVAKPAPVAQPAPAEEPPLEVVPAAEPTPGHYKYCVTLHGEFDIDKAAIRQEDK
EQIAPVCEFMKQYPTTTAVIEGHTDNVGTPEYNLDLSKRRAQAVVDYMVANCGIDRSRLE
ARGFGMARPVASNATDEGRQANRRIEAIIDCAFDVKEVKPPERLCMALVVEFDTGKADIK
PQYKDEMAKVADYMKKYPTTTAIIEGHTDNVGGYEYNMKLSRERAESAVRYLVDNFGIEK
GRLTAKGYGYTRRVAYNSTAEGRAKNRRINAIIDCVVTK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtacctgctgttgcttgttctggttcccgcattgttgttcaccctgctcccg
caggcacacgccgagatcaaggcacaaagcttctccctctcaccctttgttggcggttac
accttcatcggcaaggaacacctggaaacagcccccgccttcggtttgcgcggcggctac
aacttcacccggcacttcggcctggaggctgtgttcgactatgtccccaccgagggcaag
agaaacagcaacatcggcgacctggatgcctacaactaccacctcgacatgctctatcac
ttcatgccggaccggcagttggtcccctacgtcgcagccggttatggcgggcagtcccgt
gaagcatccgggccgttcgagaccacccgttccgccttcaactacggtgctggcgtaaag
tacttcctaactgaagccatggcgctaaggggagacctgcggcatctcatcctcagggag
gatggcgaatccttccacaacctcgagtacagcgtcgggttggacttcgtgttcggcggt
gtcaaggaggcccccgcggccgtagcaaaaccggcaccggtggcgcagccggctcccgct
gaggagccccccctggaggtggtcccggcggctgagccgacgcctggccactacaagtac
tgcgtcaccctgcatggcgaattcgacatcgacaaggccgccatccgccaggaggacaag
gaacagatcgctccggtgtgtgagttcatgaagcagtaccccaccaccaccgccgtcatc
gaggggcacaccgacaacgtcggaacccccgagtacaacctagacctttccaagcgtcgc
gcccaggctgttgtcgactacatggtcgccaactgcggcatcgaccgctcgcgtctcgag
gcgcgcggcttcggcatggcgcgcccggtggcgtccaatgcgacggacgagggacgccag
gccaaccgacgcatcgaggcgatcatcgactgcgccttcgacgtgaaggaggttaagcct
cccgagcgtctgtgcatggccctggtggtcgaattcgacaccggcaaggcggacataaag
ccgcagtacaaggacgaaatggcgaaggtcgccgattacatgaagaagtacccgaccacc
accgcgatcatcgaagggcataccgataacgtcggtggctatgagtacaacatgaagctg
tcgcgcgagcgcgccgagagcgccgtgcggtacctggtcgacaacttcggcatcgagaag
gggcgcctgaccgcgaagggatacggctacaccaggcgcgttgcctacaacagcacggcc
gaaggacgtgccaagaaccgcaggatcaacgccatcatcgactgcgtggtgacaaagtag
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