KEGG   Geomonas subterranea: KP001_14965
Entry
KP001_14965       CDS       T07936                                 
Name
(GenBank) type II toxin-antitoxin system VapC family toxin
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
gsub  Geomonas subterranea
Brite
KEGG Orthology (KO) [BR:gsub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gsub03016]
    KP001_14965
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gsub02048]
    KP001_14965
Transfer RNA biogenesis [BR:gsub03016]
 Prokaryotic type
  tRNA degradation factors
   KP001_14965
Prokaryotic defense system [BR:gsub02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    KP001_14965
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: QXE89725
LinkDB
Position
3429203..3429604
AA seq 133 aa
MYLLDTSVFSDLIKRPGGPVTRRIASVGEDAICTSIVVACELRFGAEKKRSTSLTAKVEQ
IIANIEVLSLDVDADAHYATIRNDLELRGETIGPNDLLIAAHARSLGLILVTDNVREFAR
VPGLSVENWLTLP
NT seq 402 nt   +upstreamnt  +downstreamnt
atgtacctcctcgataccagcgtattttctgacctcatcaaacgccccggggggccggta
acgcgtcggattgcctccgttggcgaggacgctatctgcaccagcatcgttgtcgcctgt
gagttgcgcttcggggccgaaaagaaacgctccacctctctcaccgccaaagtcgaacaa
atcattgccaatatcgaggtactctctctcgatgtagatgcagatgcgcactacgcgacc
attcgaaatgacttggagttgcggggggaaacgattggccccaacgatctcttgatcgct
gcccacgcccgttctcttggcctcatcctggttacggacaacgtgcgcgaattcgcacgg
gtacccggcctctccgtcgaaaactggctcaccctcccctaa

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