Geomonas subterranea: KP001_15050
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Entry
KP001_15050 CDS
T07936
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
gsub
Geomonas subterranea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA
AAA_16
ATPase
bpMoxR
AAA_30
MCM
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QXE89742
LinkDB
All DBs
Position
complement(3450973..3452343)
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AA seq
456 aa
AA seq
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MRRAKIMVVDDEHLIRWSLEQNLKKQGYEVCTAGTGEDALRIARDEQPELVLLDYHLPGI
NGLEVLQRLKEIDEEILVIMVTAQGGLETAVNTMRHGAYDYINKPFNLDEMALVVRKALE
TSELRREVVQLRSEHKKQGPPKILGNSKHMKNVLEMMAKVAKSDASTVLVQGESGTGKEL
VAKYIHYESARADKPFVAINCAAVPSTLLESELFGHEKGAFTDAKTSKKGLFELADGGTV
FLDEIGDMEIGMQAKLLRFLEDRTFRRIGGAKVIPVDVRIISATNKDLMKAIEDKSFRND
LYYRLQVIPIFLPALRERKEDILVLANHFIDVFSKEFGKPTKGISSMAEKLLVEYNWPGN
IRELKNVIERAIILGNDENLLLENLPLEIVAKASQVTVPLTTFKLPPEGIDIEEVERELI
KQSLEITDWNQSKAAKKLNLGIDAFRYRMKKFGFLK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagagcgaaaataatggtcgtcgacgacgagcacctgatccgctggtccctggag
cagaacctcaagaagcaaggttacgaggtctgcacggccgggaccggcgaggacgcgctc
aggatcgcccgggacgagcagcccgaactggtgctgctggactaccatctccccggcata
aacggcctggaggtgctgcagcggctcaaagagatcgacgaggagatactggtgatcatg
gtgaccgcccagggaggcctggagacagcggtgaacaccatgcgccacggggcctacgac
tacatcaacaagcccttcaacctggacgagatggcgttggtggtcaggaaggccctggag
acctccgagctgcgccgcgaggtggtacagcttcgcagcgagcacaagaagcaggggcca
cccaagatcctgggcaactccaagcacatgaaaaacgtgctggagatgatggccaaggtg
gccaagagcgacgcctccaccgtcctggtgcagggtgagtcgggtaccggcaaggagctg
gtggcgaagtacatccactacgaatccgcccgcgccgacaagcctttcgtcgccatcaac
tgcgccgccgtcccctccaccctgcttgagagcgagctcttcggtcacgagaagggggcc
ttcaccgacgccaagacctccaagaagggtctcttcgaactggccgacggcggcaccgtg
ttcctggacgagatcggggacatggagatcggcatgcaggccaagctgctgcgtttcctc
gaggaccgcaccttccgccgtatcggcggcgccaaggtgatccccgtcgacgtcaggatc
atctccgcgaccaacaaggacctgatgaaggcgatcgaggacaagtccttcaggaacgac
ctgtactaccggctccaggtcatcccgatcttcctccccgccctgcgcgagcgcaaggag
gacatcctggtgctggccaaccacttcatcgacgtcttctccaaggagttcggcaagccc
accaaggggatctcaagcatggcggagaagctcctggtcgagtacaactggcccggcaac
atccgcgagctgaagaacgtcatcgagcgcgccattatcctcggcaacgacgaaaacctg
ctccttgagaacctgccgctggagatcgtggccaaggcctcgcaggtcaccgtgccgctc
accaccttcaagctcccgcccgaggggatcgacatcgaggaggtggagcgcgagctgatc
aagcagtccctggagatcactgactggaaccagtccaaggccgccaagaagctgaacctc
ggcatcgacgcgttccgttaccgcatgaagaaattcggcttcctcaagtag
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