Geomonas subterranea: KP001_15220
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Entry
KP001_15220 CDS
T07936
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gsub
Geomonas subterranea
Pathway
gsub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KP001_15220 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsub03019
]
KP001_15220 (groL)
03110 Chaperones and folding catalysts [BR:
gsub03110
]
KP001_15220 (groL)
03029 Mitochondrial biogenesis [BR:
gsub03029
]
KP001_15220 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsub04147
]
KP001_15220 (groL)
Enzymes [BR:
gsub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
KP001_15220 (groL)
Messenger RNA biogenesis [BR:
gsub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
KP001_15220 (groL)
Chaperones and folding catalysts [BR:
gsub03110
]
Heat shock proteins
HSP60 / Chaperonin
KP001_15220 (groL)
Mitochondrial biogenesis [BR:
gsub03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
KP001_15220 (groL)
Exosome [BR:
gsub04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KP001_15220 (groL)
Exosomal proteins of other body fluids (saliva and urine)
KP001_15220 (groL)
Exosomal proteins of breast cancer cells
KP001_15220 (groL)
Exosomal proteins of colorectal cancer cells
KP001_15220 (groL)
Exosomal proteins of bladder cancer cells
KP001_15220 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
divDNAB
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
QXE89771
LinkDB
All DBs
Position
complement(3498883..3500526)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKIIKFDQEARNSILKGVNTLADAVKVTLGPKGRNVVIEKSYGAPLITKDGVTVAKEI
ELEDKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIYRQGSKLVAAGHNPMEIKRGL
DQAVEVLVGELKNISKPIKDHKEIAQVGTISANNDKTIGDIIAQAMEKVGKEGVITVEEA
KAMETTLETVEGMQFDRGYLSPYFVTDPERMEAAMDNVAILIHDKKISNMKDLLPVLEQT
AKSGRPLLIIAEDIEGEALATLVVNKLRGVLNVCAVKAPGFGDRRKAMLEDIAILTGGKV
ISEEVGFKLENTTLDMLGQAKKITVDKDNTTIIDGYGSEADIQGRVKMIRAQIEETTSDY
DREKLQERLAKLVGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVDEGIVPGGGVAYL
RALKSLDSLQLAPEQQFGVNVIKRALEEPIRQIAQNAGVDGSIVVDKVKNGKDAFGYNAA
DDIYVDMIEAGIIDPTKVSRSALQNAASVAGLMMTTEAMIADKPREEPAMPAMPGGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaagatcatcaaattcgaccaggaggcgcgtaacagcatcctcaaaggcgtc
aacaccctggcagatgcagttaaagtgaccctgggccccaaggggcgcaacgtcgtcatc
gagaaatcctacggcgctccgctcatcaccaaggacggcgtcaccgtcgccaaagagatc
gagctcgaggacaagttcgagaacatgggcgcgcagctggtgaaggaagtcgcttccaag
acctccgacgtcgccggcgacggcaccaccaccgctaccgtgctggcccaggccatctac
cgccagggctccaagctggtcgccgcggggcacaacccgatggagatcaagcgcggcctg
gatcaggctgtagaagtgctggtcggcgagctgaagaacatctccaagccgatcaaggac
cacaaggaaatcgcccaggtcggcaccatctccgccaacaacgacaagaccatcggcgat
atcatcgcccaggccatggagaaggtcggcaaggaaggggtcatcaccgtcgaggaagca
aaggcgatggagaccacccttgagaccgtcgagggtatgcagttcgaccgcggctacctc
tccccgtacttcgtgaccgatccggagcgcatggaagcggctatggacaacgtcgcaatc
ctgatccacgacaagaagatctccaacatgaaggacctcctcccggtgctcgagcagacc
gccaagtccggccgtccgctgctgatcatcgccgaggacatcgagggcgaggctctggcg
accctggtggtcaacaagctgcgcggcgtgctgaacgtctgcgccgtcaaggccccgggc
ttcggcgaccgccgcaaggcgatgctcgaagacatcgccatcctgaccggcggcaaggtg
atctccgaggaagtcggcttcaaactcgagaacaccaccctcgacatgctgggccaggcc
aagaagatcaccgtcgacaaggacaacaccaccatcatcgacggctacggctccgaggct
gacatccagggccgcgtgaagatgatccgcgcccagatcgaggagaccacctccgactac
gaccgcgagaagctccaggagcgcctggcgaaactggtcggcggcgtcgccgtgatcaag
gtcggcgcagctaccgaggtcgagatgaaggagaagaaggcacgcgtcgaggacgctctc
cacgcgacccgcgcggccgtcgacgaggggatcgtccccggaggcggcgtcgcttacctg
cgcgccctcaagtccctcgactccctgcagctcgctccggagcagcagttcggcgtcaac
gtcatcaagcgcgccctcgaggagccgatccgtcagatcgcccagaacgccggcgtcgac
ggctctatcgtggtcgacaaggtgaagaacggcaaggatgctttcggctacaacgctgcc
gatgacatctacgtcgacatgatcgaggccggcatcatcgacccgaccaaggtctccagg
agcgcgctgcagaacgccgcttccgtggccggtctcatgatgaccaccgaggccatgatc
gccgacaagccgagggaagagccggcgatgccggcaatgccgggcggcatgggcggcatg
ggtggcatgggcggcatgatgtaa
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