Geomonas subterranea: KP001_15245
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Entry
KP001_15245 CDS
T07936
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
gsub
Geomonas subterranea
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsub03016
]
KP001_15245
Enzymes [BR:
gsub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
KP001_15245
Transfer RNA biogenesis [BR:
gsub03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
KP001_15245
Prokaryotic type
KP001_15245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
AAA_33
Motif
Other DBs
NCBI-ProteinID:
QXE89775
LinkDB
All DBs
Position
3502093..3503109
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AA seq
338 aa
AA seq
DB search
MTPHFLPTLVNPPFGDPGVYVDFQFARRALLFDLGEIHRLGPRKILRLSDVCISHTHIDH
FIGFDLMLRIMLGRDMALRLFGPPGILRQVEHRLASYSWNLIQSYPTEFVITVTELHPDG
SGVRARFSSRRVFAREDEETLRISDGVILEEENLLLRVAFLEHSIPCLAYSFEEKLHVNF
MKNHLVELGLPVGPWLSEVKRAVLRGEADDTVVTASLPDGSEGRRLTIGELKEKVLQVVP
GEKIAYVTDTAFTPDNRRRIVELARGADYFFIEAVFLDVDAERARERAHLTARQAGQLAR
EAGAARVIPFHFSPRHLGAEDELRREVAEAFAGVQGSL
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgactccccatttcctccccaccctggtgaaccctcccttcggggaccccggcgtctac
gtcgatttccagttcgcccggcgcgccctcctcttcgacctcggggagatccaccgtctc
ggtccccgcaagatcctgcgcttaagcgacgtctgcatctcccacacccacatcgaccac
ttcatcggcttcgacctgatgctgcgcatcatgctggggcgtgacatggctctgcgcctc
ttcggcccccccggcatcctgcgccaggtcgagcaccgcctcgcctcctacagctggaac
ctgatccagagctaccccaccgaattcgtcatcaccgttaccgagctccaccccgatggc
agcggggtccgcgcccggttcagctcccgccgggtcttcgcgcgggaagacgaggaaacg
ctccgtatcagtgacggcgtgattttggaagaggagaacctgctcctgcgggtcgccttt
ttggagcacagcatcccctgcctcgcctactccttcgaggagaagctgcacgtgaacttc
atgaagaaccacctggtggagttggggctcccggtcgggccgtggctgtcggaggtaaag
cgggccgtgctgcgcggcgaagcggatgacaccgtggtaaccgcatccctgcccgacggg
tccgaagggcggcggctcaccatcggtgaactgaaggaaaaggtgctgcaggtggtgccg
ggagagaagatcgcctacgtgaccgacaccgccttcacccccgacaaccgccgccgcatc
gtggagctggcgcgcggggccgactatttcttcatcgaggcggtgttccttgacgtggat
gccgagcgtgcccgagagcgcgcccacctgacggcccgccaggcgggtcaactggcgcgc
gaggcgggggctgcgcgggtcatcccgttccacttttcaccgaggcacctgggtgccgaa
gacgagttgcgccgcgaggtagcggaggcctttgccggggtgcaaggctccctttaa
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