Geomonas subterranea: KP001_15590
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Entry
KP001_15590 CDS
T07936
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
gsub
Geomonas subterranea
Pathway
gsub00550
Peptidoglycan biosynthesis
gsub01100
Metabolic pathways
gsub01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KP001_15590
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KP001_15590
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gsub01003
]
KP001_15590
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gsub01011
]
KP001_15590
Enzymes [BR:
gsub01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
KP001_15590
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KP001_15590
Glycosyltransferases [BR:
gsub01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
KP001_15590
Peptidoglycan biosynthesis and degradation proteins [BR:
gsub01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
KP001_15590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
S1
Motif
Other DBs
NCBI-ProteinID:
QXE89837
LinkDB
All DBs
Position
complement(3586934..3589423)
Genome browser
AA seq
829 aa
AA seq
DB search
METYKAQPRQPQRRLKKSPTLKYLLWGATGGATVMLFAFLGYFFYLLGALPKVDRLADYR
PPILSQVYGQDGTLVGEFYLERRTVVPVDKMPKRLIQAFVSAEDSNFYQHKGIDYLGIAR
AAVKNLISMRKKEGASTITQQVAKSMLLTPEKKFSRKLKEAILAKRMEERLTKDEILYIY
LNQIYLGAGAYGVQLAAETYFGKEVDKLNLAEMAMLAGLPKAPNSYSPIKHLERAKERQG
YVLERMVKEGYITQAEAEYAKATPIVIQPLKKVNAEQSAYFLEQVRQQLVEKYGEERLYK
DGLKIYTTMNAEMQRGAYDSVVNGLKAVDKRQGFRGAARYLAETEVEPFCKKVEDDIDEL
SLKQGAVYQGVVTGVDPAKRELTVRVGDRTGTLPKKNMEWAGKVELVNSYGKPQAKRAIG
LGAVLELQVKEPDKNRAGAVFALDQVPEAQAALIAIDPMTGGVRAMVGGYDYKKSQFNRA
MQAKRNPGSAFKPVIYAAALEHGMTTASIIDDSQVEYESGGDKAWKPKNYDNVYRGPVTM
REALTNSINVVSVKILEKIGVGTAIDYAKKLGITSPLASNLTLALGSSSVTPMELTSAYA
VFASGGYRTTPYFVTKVLDRDGNVLEEVQEPKVPVFGKMSSAAADAPAEGDGEEGAAPPA
VPQPGQPVLSEASGGVVPVIPPETAFIMTNLMESVVSSGTGGRARALGRPVAGKTGTTND
MKDAWFVGYVPQLVAGVWVGYDQERSLGSGGSGGQAAAPIWTEFMQRALAGVPVKSFPTP
GNVTFALIDPRNGHLAKEGTPGAVQECFVSGTEPTSYGSDPAPEAASTP
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggaaacttacaaggcgcagccgcgacagccgcagcgcaggttgaagaaatcgccaacc
ctcaagtacctgctctggggcgccaccggtggcgcaaccgtcatgctgttcgccttcctg
gggtatttcttctacctcctgggcgcgctccccaaggtggaccgtctcgccgactaccgc
cccccgatcctctcgcaggtctacggccaggacggcaccctggtcggcgagttctacctc
gagcggcgcaccgtggtgccggtggacaagatgcccaagcggctgatccaggccttcgtg
tccgccgaggactccaacttttaccagcacaaggggatcgactacctggggatcgcccgc
gccgcggtgaagaacctgatctcgatgcgcaagaaggagggggcttccaccatcacgcag
caggtggccaagtccatgctgctcaccccggagaagaagttctccaggaagctcaaggag
gcgatcctggccaagaggatggaggagcggctcaccaaggacgagatcctctacatctac
ctgaaccagatctacctcggtgccggtgcctacggcgtgcagctggcggcggagacctac
ttcggcaaggaggtcgacaagctgaacctggccgagatggcgatgctggccggtctcccc
aaggcccccaacagctactctcccatcaagcacctggagcgggccaaggagcgccagggg
tacgtcctggagcggatggtgaaggaagggtacatcacgcaggccgaggcggagtacgcc
aaggcgacccccatcgtgatccagcccctgaagaaggtgaacgcggagcagtcggcgtat
ttcctcgagcaggtgaggcagcagctggtcgagaagtacggcgaggagcgcctctacaag
gacggcctcaagatctacaccaccatgaacgccgagatgcagaggggggcctacgactcc
gtggtcaacggtctcaaggcggtggacaagcgccaggggttccgcggcgcagccaggtac
ctcgccgagaccgaggtggagcccttctgcaagaaggtcgaggacgacatcgacgaactc
tccctgaagcagggagcggtctaccagggcgtggtgaccggggtagatccggcgaaacgc
gagctgacggtccgggttggtgaccgcaccgggacgctccccaagaaaaacatggagtgg
gccggcaaggtggaactcgtcaacagctacggaaagccgcaggcgaaaagggccataggc
ctgggcgcggtgctcgagctgcaggtgaaggagccggacaagaaccgcgccggtgcggtc
ttcgccctggaccaggtccccgaggcgcaggcggcgctgatcgccatcgacccgatgacc
ggcggggtgcgggccatggtcggcgggtacgactacaagaagagccagttcaaccgcgcc
atgcaggccaagaggaatccgggctccgccttcaagccggtcatctacgcggcggccctc
gagcacggcatgaccacggcgagcatcatcgacgactcccaggtggagtacgaaagcggc
ggcgacaaggcctggaagccgaagaactacgacaacgtctaccgcggccccgtcaccatg
cgcgaggcgcttaccaactccatcaacgtggtcagcgtcaagatcctggaaaagatcggc
gtgggtaccgccatcgactacgccaagaagctcggcatcacctcccccctggccagcaac
ctgacgcttgccctgggctcctccagcgtcacccccatggagctcaccagcgcctacgcg
gtgttcgcctcgggcggctaccgcaccaccccctacttcgtcaccaaggtgctcgaccgc
gacggcaacgtgctggaagaggtgcaggagccgaaggtgccggtcttcggcaagatgtcg
agcgctgcggcggatgcgcctgcggaaggggacggtgaggagggggctgccccgccggcg
gttccgcagccggggcagccggtgctctccgaggcgagcggtggcgtggtcccggtgatc
ccccccgagaccgccttcatcatgaccaacctgatggaaagcgtcgtctccagcggtacc
ggcggcagggcacgcgccctggggcgtccggtggcgggcaagaccggcaccaccaacgac
atgaaggacgcctggttcgtgggatacgtgccgcaactggtggccggggtctgggtcggg
tacgaccaggagcgcagtctcggttccggcggttccggcgggcaggcggccgcccctatc
tggaccgagttcatgcagcgcgccctggccggggtcccggtgaaatcgttccccaccccg
ggcaacgtcaccttcgccctcatcgacccgcgcaacgggcacctggccaaggaagggacc
ccgggtgcggtgcaggaatgcttcgtctcggggaccgagccgaccagctacggctcggac
ccggcgcccgaggcggcttctacgccgtaa
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