KEGG   Geomonas subterranea: KP001_16010
Entry
KP001_16010       CDS       T07936                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
gsub  Geomonas subterranea
Pathway
gsub03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:gsub00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    KP001_16010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gsub03400]
    KP001_16010
DNA repair and recombination proteins [BR:gsub03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     KP001_16010
SSDB
Motif
Pfam: Ku EFP
Other DBs
NCBI-ProteinID: QXE89916
LinkDB
Position
3676464..3677240
AA seq 258 aa
MRAMWSGSISFGLVNIPVKLYSGSQSNSLDLDMLRKNDLCPIKYLRVCKTDNKEVPYEEI
VKGYEYSDGEYIVLTDKDFESASLEKTHLIDIVNFIDEKEIDARYFEKPYYLEPDKSGPK
AYALLREALKRSGKVGVAYYVLRNRGSLGIVRPLDNLLILNQIRYSEEVRDATDLKLPGN
EQVREQEVALALTLIEQLTVKFDPAQYKDQYIDDLKRLIEEKAQGRQPVTAKAPPPPKVA
DMMALLKESLKQKRKEAA
NT seq 777 nt   +upstreamnt  +downstreamnt
atgagagccatgtggtccggttcgataagcttcggcttggtgaatatcccggtgaaactt
tacagcggctcgcagagcaactcgctcgatcttgatatgctgcgcaagaacgatctctgc
ccgatcaagtacctgcgggtctgcaagaccgacaacaaggaagttccctacgaggagatc
gtgaagggatacgagtacagcgacggcgagtacatcgtgctcaccgacaaggacttcgag
agcgcgagccttgagaagacccacctcatcgacatcgtcaacttcatcgatgagaaggag
atcgacgcccgctatttcgagaagccttactacctcgagccggacaagagcgggccgaag
gcgtacgcgctgctcagggaggccctgaagcggtcggggaaggtgggggtcgcctactac
gtcctgagaaaccgcggcagcctcggcatcgtccgccccctggacaacctgcttatattg
aatcagatcaggtattccgaagaggtccgtgacgccaccgacctgaagctgcccggcaac
gagcaggtgcgtgagcaggaagtagccctggcgcttaccctgatcgaacagctgaccgtg
aagttcgacccggcgcaatacaaggaccagtacatcgacgacctgaagcggctgatcgaa
gagaaggcgcaagggcgccagcccgtaacggccaaagcgccgcctcccccaaaggtggcc
gacatgatggcccttttgaaggagagcctgaagcaaaaacgcaaagaggcggcatga

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