Geomonas subterranea: KP001_16555
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Entry
KP001_16555 CDS
T07936
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
gsub
Geomonas subterranea
Pathway
gsub02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KP001_16555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsub02000
]
KP001_16555
Transporters [BR:
gsub02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
KP001_16555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
Zeta_toxin
SMC_N
AAA_5
TsaE
AAA_16
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QXE90015
LinkDB
All DBs
Position
complement(3794854..3796659)
Genome browser
AA seq
601 aa
AA seq
DB search
MHFGGIYEEETVGKVYDRRLMGRFVAYVVPYRRMLITALLMLPLIAASKLAQPWIIKVAI
DEHIVKGRMAGLPALAAAFLAVIFLESILMFGQVYLLQWVGQRVMYDIRVKLFSHIQRLS
TRFFDQTPVGSLVSRLTSDIEVLGEMFAAGLVTVVGDILVLAGIVGIMLWMNVRLSLVTF
SVLPVLIWVAFAFRKWMRLAFRQVRARQANLSAFLAESIGGMAVVQLFNREHDEAKEFRR
LNASYVEANLPVITWDAALYAVVESLSSVAVALIIWYGGGEIVKGTLSFGSLVAFIQYIE
KFFSPIRDLSAKYSIMQGAMASLERIFALLDNEDREPASLPVPEKATGTTPPCQGAPAHA
LQSICFNDIWFAYKERDYVLKGFSLQMKRGEKVALVGETGGGKTTVTRLLSRLYDVERGS
ITIDGTDIRELPLPALRKRIGVVLQDPYLFSGTIAYNISLGDPEALKRVEQAAAVVGADR
FIRELPKGYEEEVRERGVNFSAGERQLISFARAVAFDPEILVLDEATASVDTASERLIQQ
GLEGLMQGRTTLVVAHRLSTIRDADRIVVIHRGEKVEEGTHAELMAAQGVYYRLYQLQFK
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcacttcggcgggatatacgaggaggaaacggtagggaaggtgtacgacagacgcctg
atggggcgctttgtcgcctatgtcgtcccctaccgccgcatgctgataacggcgctcctg
atgctcccgctaatcgcggcgtccaaactggcccagccctggatcatcaaggtcgccatc
gacgagcacatcgtcaaggggcgcatggcgggactccccgcccttgccgcggccttcctc
gccgtcatcttcctcgaatccatcctcatgttcggacaggtctacttgctgcagtgggtg
gggcagcgggtcatgtacgacatcagggtcaagcttttcagccacatccagcgcctgtcc
acccgcttcttcgatcagaccccggtagggagcctggtttcccggctcaccagcgatatc
gaggtgctgggagagatgttcgccgcgggcctcgtgaccgtggtcggggatatcctggtg
cttgcggggatcgtcggcatcatgctctggatgaacgtgcggctctcgctggtcaccttc
tcggtgctgccggtactgatatgggtcgccttcgccttccgcaagtggatgcggctcgcc
ttccgccaggtgcgcgcgcgccaggcgaacctctcagccttcctcgccgagagcatcggc
ggcatggcggtggtgcagctcttcaaccgggagcatgacgaggcgaaggagtttcgacgc
ctgaacgcctcctacgtggaggcgaacctcccggtgataacctgggacgccgcgctctac
gcggtggttgaatcgctctcgtcggttgcggttgcgctgatcatctggtacggcggcggc
gagatcgtgaaggggaccctctccttcggctcgctggtggccttcatccagtatatagag
aagttcttctcgccgatccgcgatctctcggccaaatattccatcatgcagggggccatg
gcgtccctcgaacggatcttcgcgctgctggacaacgaggaccgtgaacccgcctcgctg
ccggtcccggaaaaggcaacggggacgactcctccttgccagggcgctccggcgcacgcg
ctgcaaagcatctgcttcaacgatatctggtttgcctacaaggagcgggactacgtcctg
aaagggttctccctgcagatgaagcgcggcgagaaggtggccctggtgggggagaccggc
gggggcaagaccacggtgaccaggctcctgtcccggctctacgacgtggagcgcggctcc
atcaccatcgacggcaccgacatccgggagctgccgcttccggccctgcgcaagcgcatc
ggcgtggtgctgcaggatccctatctcttttccggcaccatcgcctacaacatctccctg
ggagaccccgaggcgctcaagagggtggagcaggcagcggcggtggtcggggccgatcgt
ttcatccgggagcttcccaaggggtacgaggaggaggtgcgcgagcgcggtgtgaatttc
tccgccggcgaacgtcagctgatctccttcgcgcgcgccgtggccttcgatccggagatc
ctggtgttggacgaggcgaccgccagcgtcgacacggccagcgagcggctgatccagcag
gggctcgaagggttgatgcaggggcgcaccacgctcgtggtcgcccaccggctctccacc
atccgcgatgccgaccgcatcgtcgtcattcaccgcggcgagaaggtcgaagaagggacc
cacgcggaattgatggccgcccagggggtctactaccggctgtaccagctgcaattcaag
gattag
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