Geomonas subterranea: KP001_16560
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Entry
KP001_16560 CDS
T07936
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
gsub
Geomonas subterranea
Pathway
gsub02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KP001_16560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsub02000
]
KP001_16560
Transporters [BR:
gsub02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
KP001_16560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
7tm_7
MeaB
AAA_29
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QXE93103
UniProt:
A0ABX8LN35
LinkDB
All DBs
Position
complement(3796812..3798521)
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AA seq
569 aa
AA seq
DB search
MRNRRGAYLLGALLLVGTNVCGLAIPWLLKLAIEALQAPARAGYTPAQYGAMIAAAAVAQ
GIIRVFSRTTLLNAGRRIEYELREDLYANLLTLDRTYFSNWRTGDILSRLANDLTNVRML
LGFGVLSLLNTVVIYTASLILLTRISPFLTVCAVLPFPVMILIVKRMSASMFRVSKRTQE
ALAHLTTRVEENVSAAAVVRAYCREDGEIKSFGAVCDSYSDASMAMAKIRGMMLPVMAAT
GAIGTLVILFVGGNLVIRGELTLGGFVAFNGYLAMLVWPTIMFGWILNLVQRGAASMTRL
SEILNARPEVAEPERPVDPGEIKGEIEYRNFSFSYGGAGMLRGIDLKIARGARIGIVGVV
GSGKSTLVRMIPRLFPVAEGTLFVDGIDVNLLPLKRIRDAVGFVPQETFLFSRTIAENIG
YGKPGATREEIERAARIAGLSGDLTRFPQGLDTLVGERGVTLSGGQKQRVSIARALIKEP
SILILDDPLSAVDADTEEEILSALSGYYGKRTVLIVSHRLSPLRNCDRIIVLEQGAIVEQ
GSHAELLEVGGRYAAIHREEQLKAEIERL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatcgccggggggcttacctgttaggggccctgctgctggtagggaccaacgta
tgcggacttgcgatcccgtggctcctcaagctggccatcgaggcgctgcaggctcccgcc
agggccggctacacgccggcgcagtacggcgcgatgatcgccgcggccgccgtggcgcag
gggatcatccgcgtcttttcgcgcaccacgctcttaaacgccggccgccgcatcgaatac
gagctgcgcgaagacctctacgccaacctgctcaccctggatcggacctacttctccaac
tggcgcaccggcgacatcctgtcccgcctcgccaacgatctcaccaacgtacggatgctg
ctcggtttcggcgtcctgagcctgttgaacaccgtggtgatctacaccgcctccctcatc
ctgttaacccggatctccccgtttctcaccgtatgcgccgtactcccgttcccggtcatg
atcctgatcgtgaagcggatgagcgcctccatgttccgcgtctccaagaggacgcaggaa
gccctggcccacctcaccacccgggtcgaggagaacgtctccgccgccgctgtggtgcgc
gcgtactgccgcgaggatggggagatcaagagtttcggcgccgtgtgcgacagctacagc
gatgccagtatggccatggcgaagatccgggggatgatgctgccggtgatggctgcgacc
ggagcgatcggcactctcgtgatcctttttgtcggcggaaacctggtgatccggggggag
ctcaccttgggcgggttcgtcgccttcaacggctatctcgccatgctggtttggcccacc
atcatgtttggctggatcctcaacctcgtgcagaggggtgccgcgtctatgacgcggctg
agcgagatcctgaacgcgcgccccgaggtggcggagccggagcggcccgtcgaccccggc
gagatcaagggggagatcgagtaccgcaatttcagcttcagctacggcggcgccgggatg
ctgcgcggcatcgacctgaagatcgcaagaggcgcacgcatcggcatcgtcggcgtggtg
gggagcggcaaatcgaccctggtgcgcatgatcccgcggcttttcccggtcgctgagggg
acgctctttgtcgacggcatcgatgtcaacctgctgccgctcaagcgtatcagggacgcg
gtgggcttcgtcccccaggaaaccttcctcttctcccgcaccatcgccgaaaacatcggt
tacggcaaacccggcgcgacccgggaggagatcgagcgcgcggcgcggatcgccggcctt
tccggcgacctcacccggtttccgcaggggctggacaccctggtgggagagcggggggtg
accctgtccggggggcagaagcagcgtgtctcgatagcgcgggctctcatcaaggagccc
agcatactgattctggacgatcccctctccgcggtcgacgccgataccgaggaggagatc
ctctccgcgctttccggctattacggcaaaaggaccgtgctcatcgtgtcgcacaggctc
tcgccgctgcgtaactgcgaccggatcatcgtgctggagcagggggccatcgtcgagcag
gggagccacgcggagctcctggaggtgggaggccgctacgccgccatccacagggaagaa
cagcttaaggcggagatagagaggctttaa
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