Geomonas subterranea: KP001_16660
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Entry
KP001_16660 CDS
T07936
Name
(GenBank) ABC transporter permease
KO
K09694
lipooligosaccharide transport system permease protein
Organism
gsub
Geomonas subterranea
Pathway
gsub02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KP001_16660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsub02000
]
KP001_16660
Transporters [BR:
gsub02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipooligosaccharide transporter
KP001_16660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC2_membrane_3
Ndr
ABC2_membrane_2
Motif
Other DBs
NCBI-ProteinID:
QXE90035
LinkDB
All DBs
Position
complement(3821348..3822103)
Genome browser
AA seq
251 aa
AA seq
DB search
MFKGAFSIWGRDMLVLRRSIISELVSVIAYPLTLYLAFGFGLKGYITSVNGVPYPLFIAP
GLISMTAVNAAFDESSWSMWFHRKVQRTIEEYRVTPVTVYDIVIGKIFSGFSQGAVKGTV
VFLVILALTPFRIDYANLPVYLLSIALSSMTFSCLGTICGTVIDKPENIGRVQSVVIVPL
IFMAGIFFPLSSYPSSILPLIQLLPTTAVFEGARYALLTGVIPSQYLVNLVLTAAICFII
AVYTFDRKMAE
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaggcgctttttccatctggggcagggacatgctggtcttgaggcgcagcatc
atctcggaactcgtctccgtgatcgcctacccgctcaccctctaccttgccttcggcttc
ggcctcaaggggtacatcacctccgtgaacggcgtcccctaccctcttttcatagccccc
ggcctcatctcgatgacggcggtcaacgccgccttcgacgagagttcctggagcatgtgg
ttccaccgcaaggtgcagcgcaccatcgaggagtaccgcgtcactccggtcaccgtgtac
gacatcgtcatcggcaagatcttctccggcttctcccagggggcggtcaagggaaccgtg
gtcttcctggtgatcctcgcgctcacgccgtttcgcatcgactacgccaacctgccggtg
tatctgctcagcatcgcactctcatcgatgacgttctcctgcctcggcaccatctgcggc
actgtcatagacaagcctgaaaacatcggacgggtgcagtcggtggtcatcgtgccgctc
atcttcatggcgggaatcttcttcccgctttcttcctacccctcatccatccttccactg
atacagctccttccaacgaccgcggttttcgaaggcgcacgctatgcactactcacaggt
gtcatcccgtcacagtacctggtgaacctggtgctgacggcggcgatctgcttcatcatc
gccgtatacaccttcgaccgcaaaatggcggaataa
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