Geomonas subterranea: KP001_16700
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Entry
KP001_16700 CDS
T07936
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gsub
Geomonas subterranea
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsub03032
]
KP001_16700 (gyrA)
03400 DNA repair and recombination proteins [BR:
gsub03400
]
KP001_16700 (gyrA)
Enzymes [BR:
gsub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KP001_16700 (gyrA)
DNA replication proteins [BR:
gsub03032
]
Prokaryotic type
DNA Topoisomerases
KP001_16700 (gyrA)
DNA repair and recombination proteins [BR:
gsub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KP001_16700 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
QXE90042
UniProt:
A0ABX8LH42
LinkDB
All DBs
Position
complement(3833680..3836193)
Genome browser
AA seq
837 aa
AA seq
DB search
MLNQLNKVSVNIEDEMKRSYMDYAMSVIVGRALPDVRDGLKPVHRRCLYAMYDMSNDWNK
PYKKSARVVGDVIGKYHPHGDTAVYDTLVRMAQDFSLRYPLVDGQGNFGSIDGDSPAAMR
YTEIRMEQLAHELLNDLDKETVPFGPNYDDSLKEPLVLPSKFPNLLVNGSAGIAVGMATN
IPPHNLSEVVDAIVAIIDNPQLSFEELVELIPGPDFPTGGFIYGREGIMKAYSTGRGIIQ
MRAKVQIETQKKTERQSIVVTEIPYQVNKAKLVEKIAELVKEKKIEGISDLRDESDREGM
RVVIELKKDENPTIILNHLYKQTQMQSSFGIIMLAIVHNRPRVLTLKETIEFFIEHRKEI
VTRRTIFDLKKAEARAHILEGLKIALDNLDEVIALIKASASPAEAKVGLMEKFGLSDLQA
QAILDMRLHRLTGLEREKILEELREILKYIARLKEILASEAEILKIIVGELLELKDKFGD
KRRSEIVMQTADISLEDTIVEEDMVVTISHTGYIKRNAVTLYRAQRRGGKGKTGMKTKEE
DFVEQLFIASTKDYLMFFTDAGKVYWLKVYEIPEAGRAARGKAIVNLLNLANNEKITTIL
PVKEFVDDKFIMMATRNGVVKKTNMMEYSHPRVGGIIAVNLDEGDKLISVALTDGKQDVL
LATSNGKAIRFKEDDVRTVGRVSRGVRGMTLEDEDVVIGMEILNENFTDSTIFTVTENGY
GKRTEISEYRTQSRGGKGIITIKTTERNGQVVDIKQVVDDNDLMLITDQGKILRVSVAGF
SIIGRNTQGVRLMVKEENERVVAVARLAEKEDVEEIEDGSEIDDIVELEAEGGEGEE
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatcaactgaacaaggtatcggtaaacatcgaagacgagatgaagcgctcctac
atggactacgccatgtcggtcatcgtcggccgcgcgcttccggacgtacgcgacggcctc
aagccggtgcacaggcgctgcctctacgccatgtacgacatgagcaacgactggaacaag
ccgtacaagaagtcggcccgtgtcgtcggcgacgtcatcggtaagtaccacccgcacggc
gacaccgccgtctacgacaccctggtcaggatggcccaggacttctcgctcaggtacccg
ctggtggacggccagggcaacttcggctccatcgacggcgactccccggcggcgatgcgt
tacaccgagatcaggatggagcagctcgcccacgagctgttgaacgacctggacaaggaa
accgtcccgttcggcccgaactacgacgactccctgaaggagccgctggttctcccctcc
aagttcccgaacctcctggtgaacgggagcgcgggcatcgcggtcggcatggcgaccaac
atcccgccgcacaacctctccgaggtggtcgacgccatcgtggcgatcatcgataacccg
cagctctccttcgaggaactggtggagcttataccgggcccggacttcccgaccggcggc
ttcatctacggccgcgaagggatcatgaaggcctactccacgggccgcggcatcatccag
atgcgcgccaaggtgcagatcgagacccagaagaagaccgagcgccagtccatcgtggtc
accgagatcccgtaccaggtgaacaaggcgaagctggtcgagaagatcgcggagctggtc
aaggagaagaagatcgaggggatctcggacctccgtgacgagagcgaccgcgagggtatg
cgcgtcgtcatcgagctcaagaaggacgagaacccgaccatcatcctgaaccacctgtac
aagcagacccagatgcagtcctccttcggcatcatcatgctggccatcgtgcacaaccgg
ccgcgcgtgttgaccctgaaggagaccatcgagttcttcatcgagcacaggaaagagatc
gtcacccgccgcaccatcttcgacctgaagaaggccgaggcccgcgcccacatcctggaa
ggtctgaagatcgccctggacaacctggacgaggtgatcgccctgatcaaggcgagcgcg
tcgccggccgaggcgaaggttggcctcatggagaagttcgggctctccgacctgcaggcc
caggccatcctggacatgaggctgcaccgcctgaccggtctcgagcgcgagaagatcctc
gaggagctgcgcgagatcctgaaatacatcgcccgcctgaaggagatcctcgcctccgag
gccgagatcctcaagatcatcgtgggcgaactgctggagttgaaggacaagttcggcgac
aagcgccgctccgagatcgtcatgcagacggccgacatctcgctcgaggacaccatcgtc
gaggaagacatggtggtcaccatctcccacaccgggtacatcaagcgcaacgccgtcacc
ctgtaccgcgcgcagcgccgcggcggcaaagggaagaccggcatgaagaccaaagaggag
gatttcgtggagcagctgttcatcgcctccaccaaggattacctcatgttcttcaccgac
gccggcaaggtgtactggctcaaggtgtacgagatccccgaggcgggccgcgctgcgcgc
ggcaaggcgatcgtgaacctgttgaacctcgccaacaacgagaagatcaccaccatcctc
ccggtgaaggagttcgtggacgacaagttcatcatgatggccaccaggaacggcgtggtg
aaaaagaccaacatgatggagtactcccacccgagggtgggcggcatcatcgccgtcaac
ctggacgaaggggacaagctcatctccgttgcactcaccgacgggaagcaggacgtgctg
ctcgccacctccaacggcaaggcgatccgcttcaaggaggacgacgtccgtaccgtgggg
cgcgtatcccgcggcgtgcgcggcatgacgctggaggacgaggacgtggtgatcggcatg
gagatcctgaacgagaacttcaccgactccaccatcttcaccgtgaccgagaacggctac
ggcaagaggaccgagatcagcgagtaccgcacccagtcccgcggcggcaaggggatcatc
accatcaagaccaccgagcgcaacgggcaggtggtggacatcaagcaggtggtggacgac
aacgacctgatgctgatcaccgaccagggcaagatcctgcgcgtctccgttgccggcttc
tccatcatcggccgcaacacccagggggtgcggctcatggtcaaggaagagaacgagcgc
gtggtcgccgtggcccgcctggccgagaaagaggacgtggaagagatcgaggacggttcg
gagatcgatgacatcgtcgaactcgaggcggaggggggcgaaggggaggagtag
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