Geomonas subterranea: KP001_16745
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Entry
KP001_16745 CDS
T07936
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
gsub
Geomonas subterranea
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsub03016
]
KP001_16745 (mnmE)
Transfer RNA biogenesis [BR:
gsub03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
KP001_16745 (mnmE)
Prokaryotic type
Methyltransferases
KP001_16745 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
AAA_16
RsgA_GTPase
Csa3_N
AAA_22
Guanylate_kin
Ras
AAA_24
Roc
Motif
Other DBs
NCBI-ProteinID:
QXE90051
LinkDB
All DBs
Position
3845566..3846933
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AA seq
455 aa
AA seq
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MYVRDTIAAISTAVGEGGIGIVRISGPASLPIANSIFRAKSNGGLKSHRFSYGEVVNPGN
GDLIDEAMVVYMKGPNSYTREDVVEIQCHGGTLVVSRILSLVLTEGARLAEPGEFTKRAF
LNGRIDLVQAEAVMDVISSRTDASLALAQHQREGLLSRRITTVKEGIVYALAYVEALIDF
PEDDVDVAVETDVLGKVAPALAELDALIEGFDEGRVLRDGVSVVIAGKPNVGKSSLLNTL
LKEKRAIVTSVPGTTRDLIEEVVNINGLPVKLLDTAGIRESEDQVEQEGVRLSLDRIPKA
DLVLFVVDGASEFGQDDAAILQAIGDKSYLVVRNKADLQINAVLPAECTGPVVAISTLTG
DGVPELRDAITNAFMHGHAIDGREFVAVSKARHRDALLKARTSLQSFVTNLEAGVNLELL
PVDLRDALDAVGEVTGETTADDVLDRIFSSFCIGK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtatgttcgcgacacaatcgcagcaatcagcacagcggtaggtgaggggggaatcggg
atcgtaaggatctccggccctgcctctctgccgatagcaaacagcatcttcagagcaaag
tcgaacggtggcctaaaaagccaccgtttttcttatggcgaagtggtaaatcctggcaac
ggcgatctgatcgatgaggccatggtggtctacatgaagggccccaactcctacacccgc
gaggacgtggtggagatccaatgccatggcggcaccctggtggtttcgcgcattctgtcg
ctggtgctgactgagggggcgcggcttgcagagccgggagaatttaccaagcgcgccttc
ctgaatgggagaatcgacctggttcaggccgaggcggtcatggatgtcatctccagccgc
accgacgcctcgctggccctggctcagcaccagcgtgaagggcttctctccaggcggatt
accaccgtcaaggaagggatcgtttatgcccttgcctacgttgaagcgctcattgatttc
cctgaggacgatgtcgacgtggctgtcgagaccgatgtcctcggcaaggtagctcccgcg
ctggccgaattggatgcccttatagaggggttcgatgagggtagggtgctgcgggatgga
gtatcggtagtcattgccggcaagcccaacgtcggcaagtcgagtctcctcaacaccctg
ttgaaggagaaacgggccattgtgacctccgtccctggcaccacgcgcgacctgatcgag
gaagtggtcaacatcaacgggctgccggtgaagcttctcgatacggcagggatacgtgag
tctgaggaccaggtggagcaggagggggtcaggctgtcgctggaccgcattcccaaggct
gacctggtgctattcgtggttgacggtgccagcgagttcggccaggatgatgctgcgatc
ttgcaggcgataggcgacaagagttacctcgttgttcggaacaaggccgaccttcagata
aatgcagtgttgcctgctgagtgtaccggccctgtggttgccatttccacgttgacgggt
gatggagtgcctgaactacgcgatgccatcaccaacgccttcatgcacggacacgccatc
gacggccgggagtttgtagcagtctccaaggcgcggcaccgcgacgccctgcttaaggcg
cgtacctctttgcagtcattcgttaccaatcttgaagcgggggtgaacctggagttgtta
ccggtggacctgcgggacgcactggatgccgtgggcgaggtgaccggcgagaccactgcc
gacgatgtgctcgacaggatcttctccagcttctgcattggcaagtag
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