Geomonas subterranea: KP001_18075
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Entry
KP001_18075 CDS
T07936
Symbol
cysS
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
gsub
Geomonas subterranea
Pathway
gsub00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KP001_18075 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gsub01007
]
KP001_18075 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsub03016
]
KP001_18075 (cysS)
Enzymes [BR:
gsub01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
KP001_18075 (cysS)
Amino acid related enzymes [BR:
gsub01007
]
Aminoacyl-tRNA synthetase
Class I (G)
KP001_18075 (cysS)
Transfer RNA biogenesis [BR:
gsub03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
KP001_18075 (cysS)
Prokaryotic type
KP001_18075 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
DALR_2
tRNA-synt_1
tRNA-synt_1f
CysS_C
GHMP_kinases_C
Motif
Other DBs
NCBI-ProteinID:
QXE90297
UniProt:
A0ABX8LHT2
LinkDB
All DBs
Position
complement(4123601..4125043)
Genome browser
AA seq
480 aa
AA seq
DB search
MALRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRYLQAKGL
DVTYVRNYTDIDDKIINRANRDGVPYNEISERFIEEFDKDMARLMLQLPTFQPKATEHIP
EIIALVQRLIDKGYAYASGSDVFFRVDRFEGYLKLSKRNLEDMQAGARIEVDEKKEHPMD
FALWKGAKPGEPYWESPWGHGRPGWHIECSAMSTKFLGDTLDIHGGGKDLIFPHHENEIA
QSEAASGKPFVKYWLHNGFVNINSEKMSKSLGNFFTIKDVLERYDAEVLRFFLLSAHYRS
PIDFSDQNLKEAELGLERIYKALAGIDERLAAGTDHAATEESAELEEKCGSIGARFTEAM
DDDFNTAMALGHVFDLVRSINRALPVSPLELLARVKREVANIATTLGVCDSVPVEFMQRM
KDRKTSDMEIPVEEIEALIAERAEARKAKDFKRSDEIRDLLLAKNIVLLDGKEGTTWSVK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggctttacgcgtctacaacacccttacgggcagcaaggaagaattcgtaccgatcaac
cccggcaaggtcggcatgtacgtctgcggcgtaacggtttacgaccactgccacatcggg
cacgcccgcgcgaacgtcgtcttcgacatgatctaccgctacctgcaggccaaggggctc
gacgtcacctacgtccgcaactacaccgacatcgacgacaagatcatcaaccgcgccaac
cgcgacggcgtcccctacaacgagatctccgagcgcttcatcgaggagttcgacaaggac
atggcgcggctcatgctgcagctccccaccttccagcccaaggcgaccgagcatatcccg
gagatcatcgcgctggtgcagaggctgatcgacaaagggtacgcctacgcgtccggctcc
gacgtcttcttccgggtggaccgcttcgaggggtacctgaaactctccaagaggaacctc
gaggacatgcaggcaggggcccgcatcgaggtggacgagaagaaagagcacccgatggac
ttcgcgctctggaagggcgccaagccgggcgagccgtactgggaatccccctggggccac
ggcaggcccggctggcacatcgagtgctccgccatgagcaccaagttcctgggcgatacc
ctcgacatccacggcggggggaaagacctcatcttcccgcaccacgagaatgaaatagcc
cagtccgaggctgcgtccggcaagcctttcgtcaagtactggctgcacaacggcttcgtg
aacatcaactccgaaaagatgtccaagtcgctcggcaacttcttcaccatcaaggacgtg
ctggagcgttacgacgccgaggtgctccgcttcttcctgctttcggcgcactaccgctcc
ccgatcgacttctcggaccagaacctcaaggaagcggagctaggcctggaaaggatctac
aaggcactggcggggatcgacgagcgcctggcggccgggaccgaccacgccgccaccgag
gagagcgcagaactggaggagaagtgcggcagcatcggagcccgcttcaccgaggcgatg
gatgatgacttcaacaccgccatggcgctcgggcacgtcttcgaccttgtgcgcagcatc
aaccgcgccctgccggtctcgccgctggaactgctcgcgcgcgtgaagcgggaagtcgcc
aacatcgcgacgaccctcggggtgtgcgactcggtgcccgtggagttcatgcagcgtatg
aaggaccgcaagacctcggatatggaaattccggttgaggaaatagaggctttgatagcc
gagcgcgccgaggcccggaaggcgaaggactttaagcgcagcgacgagatcagggacctg
ctgctcgctaagaacatcgtccttttggacggcaaggaagggaccacctggtcggtgaag
tag
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