Geomonas subterranea: KP001_19915
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Entry
KP001_19915 CDS
T07936
Symbol
lptF
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
gsub
Geomonas subterranea
Pathway
gsub02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KP001_19915 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsub02000
]
KP001_19915 (lptF)
Transporters [BR:
gsub02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
KP001_19915 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
QXE90636
LinkDB
All DBs
Position
complement(4570059..4571222)
Genome browser
AA seq
387 aa
AA seq
DB search
MKRTLYRYIFNEIPPPFFVGMVTFTFVLLMGRFLKLAEMVVEKGVPFGDVLRMVSYLLPS
FWLFTIPMALLLSILLAFGRLSGDSEVTAMKSCGISLYGLLPPPLLFSVLATLGCLWVTI
YAVPWGNSSFKKLMLDIAQSSAGVSIKEKVFNNAFPDMVIYADGLDAKGQSMVGVIVHDE
RNPKAPTTIFAATGALFSDPASRSMEFQLKNGSIHRSEEGAGYRMVQFQEYILRVALADS
TPKEPRKTSEMSISELRHPPPGTPAKDVLARRLELHSRLALPFSCIVFTFVGVPLGIQNR
RSGKASGFSLSIAVILCYYVALSGFGALGEKSVLPPFLSGWGPNLIFLLAGGYLFVKTAA
EEPLPLTTLYRSAKDAVVNRIGKGVKR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggaccctgtaccgctacattttcaacgagataccgccccctttcttcgtgggc
atggtgaccttcaccttcgtccttttgatggggcgcttcctgaagctggcagagatggtg
gtcgagaagggggttcccttcggcgacgtcctgcgcatggtgagctacctcctcccctcc
ttctggctcttcaccatccccatggcgctgcttctctccatactgctcgccttcgggcgc
ctctccggcgacagcgaggtgacggcgatgaagagctgcggcatcagcctgtacggactc
ctcccccctcccctgctcttctccgtgctcgccaccctcgggtgcctctgggtcaccatc
tacgccgtcccctggggcaacagctcgttcaagaagctgatgctggacatagctcagagc
agcgccggcgtctcgatcaaggagaaggtcttcaacaacgcctttcccgacatggtcatc
tacgccgacggcctggatgccaaggggcagagcatggtgggggtcatcgtccacgacgag
cgcaaccccaaggcgccgaccaccatcttcgctgccactggcgcgctcttctccgacccg
gccagccgctccatggaattccagctcaaaaacggctcgatccaccgcagcgaggaaggg
gcggggtaccgcatggtccagttccaggagtacatcctgcgcgttgccctggccgactcg
actccgaaggagcccagaaagacaagcgagatgagcatctccgagttgcggcaccctccg
ccggggactcccgcgaaggacgtcctggcccgccgtctggagctgcatagccgcctggcg
ctcccgttctcctgcatagtcttcaccttcgtgggggttccgctggggatccaaaaccgc
cgttcgggcaaggcatccggcttctcgctcagcatcgccgtgattctctgctactacgtc
gcgctctccggcttcggcgccctcggagagaagtcggtcctgccgccgtttctttccggc
tgggggccgaacctcatcttccttctggccggcggttacctgttcgtgaagaccgctgcc
gaggaaccgctcccgctgaccaccctgtaccgcagcgccaaggacgcggtcgtaaaccgc
atcggcaagggggtaaagcgatga
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