Geomonas subterranea: KP001_20080
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Entry
KP001_20080 CDS
T07936
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
gsub
Geomonas subterranea
Pathway
gsub00500
Starch and sucrose metabolism
gsub01100
Metabolic pathways
gsub01110
Biosynthesis of secondary metabolites
Module
gsub_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
KP001_20080 (glgX)
Enzymes [BR:
gsub01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
KP001_20080 (glgX)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
MAT1-1-2
Motif
Other DBs
NCBI-ProteinID:
QXE90664
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Position
4608756..4610888
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AA seq
710 aa
AA seq
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MAMTTGRTGRKNGELPKGNTSPLGATVTRGGVNFSVFARDCTGVELLLFDRAGDATPSRV
IALDPTRNRTYHYWHIFVPGIGAGQLYGYRVAGPFEPQRGRRFDPGKVLIDPYGRAVAVP
EGYRRGDACLPGDNAASAMKSVVADPRGYDWEGDLPLKRPYSKTVIYEMHVAGFTKHPSS
GVAEEKRGTYAGLVEKIPYLKDLGVTAVELLPVFQFDPLDAPLGLRNFWGYSPVSFFAPH
AAFSSKQGPLGPLDEFRDMVKALHKAGIEVILDVVYNHTSEGDHNGPTFCFRGFANDVYY
SLHADGSYINHTGCGNTLNANHHVVRRLIIDSLHYWVKEMHVDGFRFDLASILSRDGQGR
PLKNPPILWDIESDPALAGIKLIAEAWDAGGLYQVGSFIGDSWKEWNGEFRDDVRRFLKG
DEGVVSRFAARMLASPDIYGHQEREPEQSINFVTCHDGFTLNDLVSYNDKHNEANGENNR
DGSDTNLSWNCGVEGATGDVGIEALRNRQVKNFMAVTLLALGTPMILMGDEMRRTQRGNN
NAYCQDNELGWFDWDRLALHQDVYRFTKELIRARLWQSDTPAETLTLNQLLGQARLEWHG
VHLGSPDWSYQSHSIALTVWSASKHLVFHYMVNAYWEPLSFTLPPPRRLPGGAWHRWIDT
SLESPEDITPWEVMPVVACDSYRLPPRSLVVLVARRSPRNSSRPAAPATP
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgacgactggaagaacaggcaggaaaaacggtgaacttcccaagggaaatacc
tcgcccctgggcgccaccgtgacccgcggcggggtgaacttcagcgtcttcgccagggat
tgcacgggggtggagctgctcctcttcgatcgcgccggcgacgccaccccctcccgcgtc
atcgccctggaccccacgcgcaaccgcacctaccactactggcacatcttcgtccccggt
atcggcgccggccagctttacggctaccgcgtcgccggccccttcgagccgcagcggggg
cgacggttcgacccgggcaaggtgctcatcgatccctacggccgcgccgtggccgtcccc
gaaggataccgccgcggcgatgcctgcctccccggcgacaacgcggcgagcgccatgaag
agcgtcgtcgccgacccgcgcggctacgactgggaaggggacctcccgctcaagcgcccc
tactcgaagacggtcatttacgagatgcacgtggccggcttcaccaagcatccctcctca
ggcgtcgccgaggaaaagcgcggcacctacgccggcctggtggagaagatcccctacctg
aaggacctgggcgtcaccgccgtggaactcctcccggtattccagttcgacccgctcgac
gctcccctggggctgcgcaacttctgggggtacagccccgtctccttcttcgcgccccat
gccgctttcagttccaagcaggggccgctagggccgctggacgagttccgggacatggtc
aaggcgctgcacaaggccggcatcgaggtgatcctcgacgtggtctacaaccacacctcc
gagggggatcacaacggccccaccttctgtttccgcggcttcgccaacgacgtctactac
tcgctccacgccgacggcagctacatcaaccacaccggctgcggcaacaccctgaacgcc
aaccaccacgtggtgcgccggctgatcatcgactccctgcactactgggtaaaggagatg
cacgtcgacggtttccgcttcgacctcgcctcgatcctctcccgcgacggacagggacgg
ccgctcaagaaccctcccattctctgggacatcgagtccgaccccgccctggccgggatc
aagctgatcgccgaggcgtgggacgccggcgggctgtaccaggtggggagcttcatcggc
gacagctggaaggagtggaacggcgagttccgcgacgacgtgcgccgcttcctgaagggg
gacgaaggggtcgtgtcgcgcttcgcggcgaggatgctggcgagtccggacatctacggc
caccaggagcgcgagcccgagcagagcatcaacttcgtcacctgccacgacggcttcacc
ttgaatgacctggtttcctacaacgacaagcacaacgaggccaatggcgaaaataaccgg
gacggctccgacaccaacctgagctggaactgcggcgtcgagggggcgacgggcgacgtc
gggatcgaggcgctgcgcaaccgccaggtgaagaacttcatggcggtcaccctgctcgcg
ctggggacaccgatgatcctgatgggtgacgagatgcgccgcacgcagcgcggcaacaac
aacgcctactgccaggataacgaactggggtggttcgactgggacaggctcgcgctccac
caggatgtctaccgcttcaccaaagagctgatcagggcgcggctgtggcaaagcgacacc
ccggcggagacgctgacgctcaaccagctcctcgggcaggcgcgactggagtggcacggc
gtgcacctcggcagcccggactggagctaccagtcccacagcatcgccctcaccgtctgg
agcgcgtcgaaacacctcgtgttccattacatggtcaacgcctactgggagccgctcagc
ttcacgctccccccgccgagaaggcttcccggcggcgcctggcaccgctggatcgacacg
tcgcttgagtccccggaagatatcaccccgtgggaggtgatgccggtggtcgcctgcgac
agctaccgcctgccgccgcgcagcctcgtggtgctggtggccaggcggagcccgagaaat
tcctcacggccggctgccccggccaccccgtga
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