Geomonas subterranea: KP001_20875
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Entry
KP001_20875 CDS
T07936
Name
(GenBank) L,D-transpeptidase family protein
KO
K19236
L,D-transpeptidase YcfS
Organism
gsub
Geomonas subterranea
Pathway
gsub01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
KP001_20875
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gsub01002
]
KP001_20875
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gsub01011
]
KP001_20875
Peptidases and inhibitors [BR:
gsub01002
]
Cysteine peptidases
Family C82
KP001_20875
Peptidoglycan biosynthesis and degradation proteins [BR:
gsub01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
KP001_20875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
LysM
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
QXE90807
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Position
4766132..4767085
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AA seq
317 aa
AA seq
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MACHLPLVHCVAVSALVLPALLVPTAQPAVAMPPVYAEGFIGEMRQHKVRPRESLIEIAR
TYDLGYIEIRDANPGVDPVLPTPGTVVTIPSAWIPPAVLERPAIVVNLAEMRLYFFTTKD
DSGVLSFPIGIGDVGTDTPVGKFVVAEKLINPSWHVPESIRRQNPQLPRIIAPGVRNPLG
RHALRLSRADILIHGTNRPWGIGRRSSHGCLRLYTRDMAILFGQAKKGTQVWIVSEPVKV
GVKGRRVFIELHCGGRETPGLGEILHALSDRGLLQWIDLGKLVRAYYENKGYPIDISWAD
RIVRGLAEPPGRWLATS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcctgccacttgcccctcgtacactgcgtagcagtatcggcgcttgtcctgccagca
cttctcgtaccgacagcacagcctgctgttgccatgccaccagtctacgctgaaggcttc
attggggaaatgcgtcagcacaaggttcgcccacgggaatccctcatcgaaatcgccagg
acgtacgaccttgggtacatcgaaatacgtgacgccaatccgggagttgacccggtccta
cccacgccaggaactgttgttaccataccttcggcctggattcccccggcagttttagag
cgtcctgccattgtggtgaacttggctgagatgcgcttgtactttttcactaccaaagat
gactccggtgtcctttcctttccgataggcattggcgatgtaggtaccgacactccggtc
ggaaagtttgttgtggcggaaaaactcattaaccccagttggcatgttccggagtcgata
agacgacagaacccgcaacttccccgaattattgctcctggagtccgaaatcctttgggg
aggcatgcgctgcgcctttcacgcgcagacattctcatccatggaacaaaccgtccctgg
gggataggcagacgatcaagccacggttgcctgcgcctttacacgcgcgacatggccatc
cttttcggacaagcgaagaaaggcacgcaggtctggatcgtcagcgagcctgttaaggtg
ggagtcaagggccggagggtgtttattgaacttcattgcggcgggagggaaacgcctggt
ttgggagagatcctgcatgctttgtcggaccgggggctactgcaatggattgatttgggg
aaactggtccgtgcctattacgaaaacaaggggtatcccatcgacataagctgggctgac
cgaatagtgagggggctcgccgagcccccgggaaggtggctcgctacttcttag
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