Geomonas subterranea: KP001_21565
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Entry
KP001_21565 CDS
T07936
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
gsub
Geomonas subterranea
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsub02000
]
KP001_21565
Transporters [BR:
gsub02000
]
Other transporters
Pores ion channels [TC:
1
]
KP001_21565
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OprF
Motif
Other DBs
NCBI-ProteinID:
QXE90930
UniProt:
A0ABX8LN16
LinkDB
All DBs
Position
complement(4935868..4937190)
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AA seq
440 aa
AA seq
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MTTAPKTLKAIDSFGLSPVVGGYYFSSTHALDPAPTYGVRVSYDHVGKGLIDSIGVEATF
NYLSTTVKNSDKKATAYLFRTDAIYSFDPRSKWVPFLALGAGGIFENRDGARDSSPFLNF
GVGIKYFFDDYLAVRADLRQLMVYNNVNTSNDFELTTGLTYYFGKERKKKAPPPPPPKPV
IPVPQIVEEAPAATPATQEAPAVAAPPPDIVELLGATGAAALGLNTLPPQFQPGTAPQAQ
PKVPAQAYKSTLKQMPKVAAPPKAAPVAEPAPPVAKVPEAVPAPAPISKPAPVPVQPPAA
VPPPAVAQAPQPAAPPQEPARQPQRSIRTLTIEFLFSSPAIRPIYQAQLAAFAALMKANT
ESTALIEGHTDNVGDSKSNLDLSQQRAQNVKNELLKHGVDPAKVTIKGYGFSKPRASNKT
NEGRQKNRRAVVTLTLVITQ
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacagcacccaagacactgaaggccatagactccttcgggctctctcctgttgtc
ggcggctattatttttcctccactcacgccctcgaccccgcccccacctacggtgtgaga
gtgagctatgaccatgtgggcaagggcttaatcgacagcatcggcgtcgaggccaccttc
aactacctcagcaccaccgtgaagaattcggacaagaaggcgaccgcctacctgttccgc
accgacgcgatctactccttcgatcccaggagcaagtgggttccgttcctcgcactgggg
gcgggggggatcttcgagaaccgcgacggggcccgggacagcagcccctttctcaacttc
ggcgttggcatcaagtacttcttcgatgactacctggccgtcagggcggacctgcgccag
ctgatggtctacaacaacgtcaacaccagcaacgacttcgagctcaccaccggcctgacc
tactacttcggcaaggaacgcaagaagaaggcgcctcctccccccccgcccaagccggtg
atcccggtgccccagatcgtggaggaagcacccgcggccaccccggcgacgcaggaagcc
cctgcggtggcggcaccgccccccgacatcgtcgagcttttgggagcgacgggcgcagcg
gcgctgggtctcaacaccctgccgccgcagttccagcccggcacggcgccccaggcgcag
ccaaaggttcccgcgcaggcgtacaagtccacgctcaagcagatgcccaaggtcgcggcg
ccgcccaaggcggcaccggtcgccgaacctgctccgcccgttgccaaggtcccggaggcg
gtaccggccccggctccgatatccaagcctgcaccggtaccggttcagccgcctgcggcc
gtgccgccgccggcagttgcgcaagcgccccaaccggcggcgcccccgcaggagccggcg
cgccagccgcagcgctccatcaggactctcaccatagagttcctgttcagcagtcctgcc
atccggcctatctaccaggcgcagttggcagcgttcgccgcactgatgaaggcgaacacc
gaatcgaccgcccttatcgaagggcacacggacaacgtgggcgacagcaagtccaacctg
gacctctcgcagcagcgcgcgcagaacgtcaagaacgagctgctcaagcacggcgtcgat
cccgccaaggtaaccatcaagggttacggcttctccaagccgcgggccagcaacaagacc
aacgaggggagacagaaaaaccgcagggcggttgtgacgctcaccctggtgatcacgcag
taa
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