Geomonas subterranea: KP001_21740
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Entry
KP001_21740 CDS
T07936
Name
(GenBank) TonB-dependent receptor plug domain-containing protein
KO
K16092
vitamin B12 transporter
Organism
gsub
Geomonas subterranea
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsub02000
]
KP001_21740
Transporters [BR:
gsub02000
]
Other transporters
Pores ion channels [TC:
1
]
KP001_21740
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Plug
OMP_b-brl_3
Porin_4
Motif
Other DBs
NCBI-ProteinID:
QXE93148
UniProt:
A0ABX8LN75
LinkDB
All DBs
Position
complement(4975423..4977225)
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AA seq
600 aa
AA seq
DB search
MGVEGDEVTRSLGLSGEEPAGVSRLPRPASLIAENVTVVTAEEIARLNAHTVADVLQTVP
GVQLDLLQTPGSILLYNVLGSSNRHILVQLDGVPQNFVGGENLAHLGLIPAQVVERIEII
KGAASAAWGSALGGVINIITKSPAPDRGATGLASASIGTAATSDLRGEISGSRDAFGYYL
TAGTIHSNGLIPGNNVDFRHGFGKLTYDFAGGARATLGLDIRHADMGLMRSVKYDFYENG
EVRYLNGYLSLQVPLAQRLTLEVNGRGGVRESTDRRGVLSQGILFFTPEARETHQGYTAD
LTWGDAQNGVKTGVEYERIEVRQREPLQRIPGSNSDLGLDRHSFYANGTYTIGRFSLLPG
VRVDHLNLLDDPVSATLGATLRLGQDTLLRGYAARGYSLPLISRYGSPTGELEHELQQVG
TVQGGVETTAVPYLWLKGMLFHTNVWNIQEYDFQAGLLYRDKQRRHGVDLELRTSPWHGL
SLNGAYTFTDARNRATGEQLEGSQSGPRHAVKGALTYDNDEAGLTAVLTANYTNWNLTAP
GARSQATLWDLHLNQKLLPARDNSPELFFSLRNIFDTKLYEYDFRPAAPRWFEVGGRFRF
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgggagtggagggggacgaggtgacccgctcgctcggcctctccggggaagagcctgcg
ggcgtctcgcgcctcccccgccccgcatccctcattgccgaaaacgtcaccgtggtcacc
gccgaggagatcgcccggctgaacgcgcataccgtggcggacgtgctgcagaccgttccg
ggtgtgcagttggaccttttgcagactcccggctcgatcctgctctacaacgtgctcggc
tcctccaaccgtcacatcctggtgcagctcgacggcgtgccccagaacttcgtcggcggc
gaaaacctggcccacctcggcctcatcccggcgcaggtggtcgagcggatcgagatcatc
aagggagctgcgtccgccgcctggggctccgcccttgggggggtgatcaacatcatcacc
aagtcgccggcgcccgaccggggggccaccgggctcgcctcggcctccatcggcacggcg
gccaccagcgacctgcggggggagatcagcggcagcagagacgcgttcggctactacctt
accgcagggaccatacactccaacgggctcatccccggcaacaacgtcgatttccgtcac
ggtttcggcaagctcacctacgacttcgccggcggcgccagggcgacgctggggctcgac
atccgccatgccgacatgggcctgatgcggtcggtgaagtacgacttttacgaaaacggc
gaggtccgctacctcaacggctatctctcgctgcaggtcccgctggcccagcgcctgacg
ctcgaggtgaacggtcgcggcggagtgcgtgagagcaccgaccgcaggggggtcctctcc
caggggatcctctttttcaccccggaggcgcgcgagacacaccaggggtacaccgccgac
ctcacctggggggacgcccaaaacggcgtcaagaccggggtggaatatgagaggatcgag
gtgcgtcagcgcgagccgctgcagcgcatacccgggagcaactcggaccttggcctcgac
cggcattccttctacgccaacggcacctataccatcgggaggttctcgctgcttcccggc
gtgcgcgtcgaccacctgaaccttctggacgacccggtgagcgcgacgctgggggcgacc
ctgcgcctggggcaggacacgctcctgcgcggctatgccgcgcgcggctacagcctcccc
ttgatcagccgctacggctcgccgaccggggagctggagcacgaactgcagcaggtcggc
accgtgcaggggggggtggagaccacggccgtcccgtacctctggttgaaggggatgctg
ttccacaccaacgtctggaacatccaggagtacgacttccaggcgggcctgctgtacagg
gacaaacagcgccgtcacggcgtcgacctcgagctgcgaacctcaccctggcacggcctc
tccctcaatggcgcctacaccttcaccgacgcgcgcaaccgcgccaccggggagcagctg
gaaggaagccaaagcggtccgcgccacgcggtgaaaggggcgctcacctacgacaacgac
gaagccggtctcaccgcggtcctgaccgcgaactacaccaactggaacctcaccgccccg
ggcgcccggtcccaggcgaccctctgggatctgcacctgaaccagaagctcctgccggcc
cgcgacaactcgccggaactcttcttctcgctgcgcaacatcttcgacaccaagctctac
gagtatgacttccgtccagcggcaccgcggtggttcgaagtcggggggaggttccggttc
tga
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