Gardnerella swidsinskii: K9E37_00210
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Entry
K9E37_00210 CDS
T08402
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gsw
Gardnerella swidsinskii
Brite
KEGG Orthology (KO) [BR:
gsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsw03032
]
K9E37_00210
03400 DNA repair and recombination proteins [BR:
gsw03400
]
K9E37_00210
Enzymes [BR:
gsw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K9E37_00210
DNA replication proteins [BR:
gsw03032
]
Prokaryotic type
DNA Topoisomerases
K9E37_00210
DNA repair and recombination proteins [BR:
gsw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K9E37_00210
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
WD40_CDC20-Fz
Inp1
PEP5_VPS11_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UQA88632
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All DBs
Position
complement(52456..55119)
Genome browser
AA seq
887 aa
AA seq
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MPSRHHSTQQAFDPRKVKEHIVETPLNEEMSKSFLEYAYSVIYARALPDARDGMKPVQRR
IVYQMGNMNLSPDHAYMKSARVVGEVMGKLHPHGDSAIYEAMVRLAQPFSLRLPLVDGHG
NFGSLDDGPAASRYTEARLAPASLGMNADINEDTVDFVPNYDNKLKEPTVLPAAIPNLLV
NGASGIAVGMATNMATHNLGEVVAAAKYVMKHPDATLDDLMKLVPGPDWPSGGIIIGRSG
IREAYATGRGAFTTRSTTHIENITARKKAIIVTELPFMVGPERVLERISQGVKSRKLDGI
SGAIDLTDRHNGTRIVIEIKTGFDPNAVLAQLFKHTPLQESFTINNVALVDGRPHTMGLR
ELLDVWISHRRTVVRRRSEFRRKKAQERLHLVDGLLLALLDIDEVIQVIRSSEDADSAKT
KLIKVFDLDEIQAQYILDLRLRRLTKMSRIELEAERDDLLKKIEELNQILSSEAKLDNVV
IADMDSAVKQWDTPRRTILLDENEDGSFTPVASSINKNSEDIAIKAVQSANKITSTQADL
AAAANAARKTGEADASSVAMQLSDEPCAVALSTSGLIARTSIAVLEHWNSHNNNVFNTPC
KTMFATTTRSTCALVTSSGRLVLAHVADLPQLNYEEGKPALLNHGVKAQELLTSTQSTDP
VRGERVVSAIAFDASQNATPLAIGTRNGVVKRWNFEAPTTMDSWSIIDLKDDDTVIAAAP
AKDNDRLVFISSDSSLLTFDAKQVRPQGRTAGGMAGIRLAEGAKVATFAVVPEKSIEWHY
EEGENGLFSASGTVVFTVAGDSEALPGTENGSAKITPFDMYPTKGRATGGVRSQRFLKGQ
DTLIHAYVGYYPLQAVTEGGSNVELPKPDMRRDASGTELVSPIAHIG
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgccctcacgccatcactcaacacagcaagctttcgacccaagaaaagttaaagagcat
attgttgaaacaccattaaacgaagaaatgagcaaatccttcttggaatatgcttattca
gttatttatgctcgagctttaccggacgcacgagacggaatgaaaccagtgcagcgacgc
attgtgtatcaaatgggcaatatgaatttgagtcctgatcatgcttatatgaaatcagcg
cgtgttgttggtgaagtaatgggtaaacttcatcctcacggtgattctgcaatctatgag
gcaatggttcgtctagctcaaccattttccctacgcttgccgcttgttgacggacacggt
aattttggctctcttgacgacggtccagcagcttctcgatacaccgaagcgcgtttagct
cctgcatcactaggtatgaacgcggatatcaacgaagacacagttgatttcgtaccaaat
tacgacaataaactaaaagaacctactgtgcttcctgcagctattccaaatcttttagta
aatggcgcttctggaattgctgtaggcatggcaactaatatggcaacgcataatctaggc
gaagtagttgctgcagcaaaatatgttatgaaacatcctgacgcaaccctagatgatctt
atgaaactagttccaggacctgactggcctagcggaggaattatcattggtcgaagtggc
attcgcgaagcttacgcaacaggtcgcggagcattcactacaagatctacaacacatatc
gaaaatattactgctcgcaaaaaagctattattgttacagaacttccgtttatggttggc
ccagagcgcgttttggaaagaatttctcaaggagttaaatcaagaaaattagacggtatt
tcaggtgctattgatttaacagatcgacataacggaactcgtattgttattgagattaag
acaggctttgatcctaacgctgtgcttgctcaactttttaagcacactcctttgcaagag
agctttactattaacaatgttgcacttgttgacggtagacctcacacaatgggcttgcga
gagctattagacgtttggatttctcaccgcagaaccgtggtacgcagacgcagcgaattt
aggcgcaaaaaagctcaagaacgcttacatttggttgatggcttgcttcttgcacttctt
gatattgatgaagtaattcaggtcattcgttcatctgaagatgcagatagtgcaaaaact
aagttaattaaagtattcgatcttgatgaaattcaagcacagtatattcttgacttacgt
cttcgcagacttactaaaatgagccgaatagagctcgaagctgaacgcgacgatttgctc
aaaaaaattgaagagctaaatcaaatattaagttctgaagctaaactcgacaacgtcgta
atagcagatatggattctgcagttaaacaatgggatactccacgcagaacaattttgctt
gacgaaaatgaagatggtagttttactccagtagcctccagcataaataaaaacagtgag
gatattgcgattaaagccgttcaatcagcaaataaaattacttcaactcaagcagatttg
gctgcagcagctaatgcagctcgtaaaactggagaagctgacgcatcttctgtcgcaatg
caattaagtgacgaaccttgcgcagtagcattaagcacttcagggttaattgccagaaca
agcattgcagtgttagaacattggaattcgcacaacaacaacgtatttaacactccttgt
aaaacaatgtttgcaacaacaacgcgttcaacttgtgctcttgttacttcatctggtcga
ctagttctagctcatgttgcagatttgccacaacttaactatgaagaaggaaaacctgcg
ctgctcaaccacggagtaaaagcacaagaactgctaacttccacgcaaagcacggatcca
gtaagaggagaacgcgtagtttcagcaatagcatttgatgcctcacaaaacgctactcca
cttgcaattggaacacgaaacggtgtagttaaaagatggaattttgaagctccaactacc
atggattcatggagcataattgacttaaaagacgacgacaccgttattgccgcagctcca
gcaaaagacaacgacagactcgtgttcattagtagtgattcttcattacttacctttgac
gctaaacaagttagaccacaaggacgcacagcaggcggaatggcaggcattcgtttagca
gaaggtgctaaagttgcaaccttcgcagtagtgccagaaaaatcaatagagtggcattac
gaagaaggtgaaaatggtttattctccgcttctggaacagttgtattcaccgttgctgga
gacagtgaagctcttcctggaaccgaaaacggttctgcaaagattactccatttgacatg
tacccaacaaaaggtcgcgcaactggtggcgtgcgctcgcaaagattccttaaaggtcaa
gatacgttgatacacgcgtacgttggatactatccattgcaagccgttacagaaggcgga
agcaatgttgagttacctaagccagatatgcgtagggatgcttctggaactgaactcgtt
tccccaattgcgcacattgggtag
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