Gardnerella swidsinskii: K9E37_00505
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Entry
K9E37_00505 CDS
T08402
Symbol
cas2e
Name
(GenBank) type I-E CRISPR-associated endoribonuclease Cas2e
KO
K09951
CRISPR-associated protein Cas2
Organism
gsw
Gardnerella swidsinskii
Brite
KEGG Orthology (KO) [BR:
gsw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
gsw02048
]
K9E37_00505 (cas2e)
Prokaryotic defense system [BR:
gsw02048
]
CRISPR-Cas system
Universal Cas proteins
K9E37_00505 (cas2e)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cas_Cas2CT1978
RNase_T
Rv2179c-like
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
UQA88687
LinkDB
All DBs
Position
122683..123762
Genome browser
AA seq
359 aa
AA seq
DB search
MPLTVITMTNCPLSLRGDLTKWMQEIASGVYVGNFNSRVREELWKRIEDCVGNGAVTMSF
SSRNEIGYDFKTIHSHREVVYSDGLPLVRIPTVDTLENDIKHGFSDAAHFHNAKKFSNIR
RKNINTPSSTIENNFANENISYLSYDNASQTAKFTTDDEEITCTDYWKDFIDKIDKNFVV
IDCETTGLNSKVDKIIEIGAVKFIDGKIEEFQKLININCDSVSNFNKNNFILNEIIELTG
ITSSMLESYGVRLDLALKEFIDFVEKLPVLGYNVQFDMSFLNSALSSLDERFDHSLSINK
IFDISRFVKKEKKFLKNYQLKTVLHEYNIAESVPHRALLDARLTAHLVFNLKGLLKFIS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgccgttaactgtgattacgatgacgaactgtccactatctttaagaggtgatttaact
aagtggatgcaagaaatagcatcaggagtttacgtcggcaattttaatagtcgagttcga
gaagaattatggaagcgcatagaagactgtgttggcaatggtgctgtaacaatgagcttt
tcttctagaaatgaaattggctacgattttaagactatacattcgcatcgtgaggtggtt
tattcggatggattacctctggtacgtattccaacagttgatacattagaaaacgatatt
aaacatggatttagcgatgcagcacattttcataatgcaaagaaattttcaaatataagg
cgtaaaaatattaatactccttctagcacaattgaaaataattttgctaatgaaaatatt
agttatctaagttatgataatgcttctcaaactgcaaaatttactacggatgatgaagag
ataacttgtaccgattactggaaggattttatagataaaatagataaaaattttgttgta
atagattgcgaaactacaggtttaaatagcaaagttgataaaattatcgaaattggagcc
gttaagttcattgatgggaaaattgaagaattccagaaattaataaatattaattgcgat
agcgttagtaattttaacaaaaataattttattcttaatgaaattattgagctaactggt
attacatccagcatgcttgaatcttatggtgtcagattagatttagcattaaaagaattt
attgattttgtcgaaaaattacctgtacttggatataacgtacaatttgatatgtcattt
ttaaattctgctttatcttcattagatgaaagatttgatcattctctttcaattaacaaa
atttttgatatttctcgttttgtaaagaaagaaaagaaatttttaaaaaactaccaatta
aaaacagtgctgcacgaatacaacattgctgaatctgttccacatagagctcttctggat
gctagactaacagcgcatcttgtttttaatttgaaaggattgctaaaatttatttcataa
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