Gardnerella swidsinskii: K9E37_00955
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Entry
K9E37_00955 CDS
T08402
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gsw
Gardnerella swidsinskii
Pathway
gsw00061
Fatty acid biosynthesis
gsw00071
Fatty acid degradation
gsw01100
Metabolic pathways
gsw01212
Fatty acid metabolism
gsw02024
Quorum sensing
gsw04146
Peroxisome
Module
gsw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gsw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
K9E37_00955
00071 Fatty acid degradation
K9E37_00955
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K9E37_00955
09145 Cellular community - prokaryotes
02024 Quorum sensing
K9E37_00955
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gsw01004
]
K9E37_00955
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsw04147
]
K9E37_00955
Enzymes [BR:
gsw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
K9E37_00955
Lipid biosynthesis proteins [BR:
gsw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
K9E37_00955
Exosome [BR:
gsw04147
]
Exosomal proteins
Exosomal proteins of breast milk
K9E37_00955
Exosomal proteins of breast cancer cells
K9E37_00955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
LHD_TRPY1
Motif
Other DBs
NCBI-ProteinID:
UQA88764
LinkDB
All DBs
Position
225806..227854
Genome browser
AA seq
682 aa
AA seq
DB search
MSVFNALQQQAFNLARKALRIGSNFAHPVSDDRAGEPDYLNTDQENTNTLLSQKQRLPHV
EEWGAQMPTTTFIDPETGLLTTKTESAAPLDEGTSIYDLYADRAARMGDDPLYTYKENDK
WVTKTANQFLQEVRDAAKGLMHYGLRKGDAVALMCKTSYEWDVTDAAVMACGGVLATIYD
TDSAEQIRNIVNNSDSRFLIVETTDMRDKADGAIEECPSLEHIICIETGGLAELQAFGYA
VSDEELDARIDSVKKTDLCSIVYTSGSTAAPKGVEMTHEHYCTTALNLPVYLPNLLSEKD
GSVLLFLPQAHSFARAINYIVVASTLRIYIAQGIPTLISDLQVAKPTVMIVVPRVLEKVY
NAASQKAGHGAKGLAFQGAVVTAQQYMKEVQEFGDAKALTKARRTAYDPLVYRPLRQALG
GRARWIVAGGAPLDPELLSFFRGAGVPVYEGYGLTETTAPCAFTPIGVPFREGSVGIAFP
AFTLRIASDGEVQIKGTCVFHKYHKNDEATETSFTKDGWYATGDLGRIDDDGMLYITGRK
KDLIITAGGKNVAPGPIEEMIKRCELVSQALVLGDKRPFISALVTLDEETLRNWLKLKGL
DATMSMEEAANNAVVRAEVQKFIDLANEGVSRAESVRKFIILPEEFTQENGLMTASMKII
RPRVIKRYTTLLNTQMYTTRKK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgtttttaatgcactccaacagcaagcgtttaatcttgcccgtaaagcattgcgt
attggcagtaacttcgcgcacccagtcagcgatgaccgtgcaggcgaaccagactacctt
aatacggatcaagaaaacacaaatactttactttcacaaaagcaacgccttccacacgta
gaagagtggggcgcgcaaatgccaacaacgacgtttatcgatccggaaacaggcttgctg
accacaaaaaccgaaagcgcagcacctcttgacgaaggcacaagcatttatgacttatat
gcagatcgcgcagcacgtatgggtgacgatccgctttacacttataaagaaaacgataag
tgggtcacaaaaacagctaatcagttccttcaagaagtacgcgatgctgcaaaaggtttg
atgcactacggattgcgcaaaggcgacgccgttgcccttatgtgcaaaacatcatatgag
tgggacgtcaccgacgcagcagttatggcttgtggtggtgttcttgcaactatttatgac
acggattcagctgagcaaattcgcaatattgtgaataattccgactcgcgtttccttatt
gttgaaacaactgacatgcgagataaagctgatggagctattgaagaatgcccaagcttg
gaacacattatttgcattgaaacaggcggtttagcagaacttcaagctttcggatacgct
gttagcgatgaggaactagatgctcgcattgattctgtaaagaaaacagacttgtgctct
attgtttacacttctggttccacagctgcacctaaaggcgtggaaatgactcacgaacac
tattgcactacagcgttgaatttgcctgtttacttgccaaatttgcttagcgaaaaagac
ggttctgtgcttttgttccttcctcaagcacactcttttgcaagagcaattaactatatt
gttgttgcaagtacgttgcgcatttatattgctcaaggtattcctactttgatttctgat
ttgcaagttgcaaaacctacggttatgatcgttgtccctcgagttcttgagaaggtttat
aacgcagcttcgcagaaggctggtcacggtgctaaaggcttggctttccagggtgctgtt
gtgacggctcaacagtatatgaaggaagttcaggaatttggtgatgctaaagctcttact
aaagctcgccgcactgcttacgatccgcttgtttatcgtccacttcgccaagctcttggc
ggtcgcgcacgctggattgttgcaggtggagctcctctagatcctgaattgctttcattc
ttccgcggagcaggagttcctgtctacgaaggttatggtcttacagaaactactgcacca
tgcgcgtttactcctattggagttccattccgagaaggttctgttggcattgcattccca
gcttttactttgcgaatcgcatccgacggcgaagttcaaattaaaggcacttgcgtattc
cataagtatcacaaaaacgatgaagcaacagaaacttcatttactaaagatggatggtat
gcaacaggcgatttgggacgaattgacgacgatggcatgctttatattaccggacgtaag
aaggatttgatcattactgctggcggtaagaatgttgctcctggacctattgaagagatg
attaagagatgcgaacttgtgtctcaagctctcgttcttggagataagcgtccgtttatt
tctgcacttgttactttagacgaagaaactttacgaaattggcttaaactcaagggtctt
gacgctactatgagcatggaagaggctgctaataatgctgtcgttcgtgctgaagtgcaa
aaatttatagatcttgccaacgaaggcgtgtcacgcgcagaatctgtgcgaaagttcatt
attttgccagaagagtttacgcaagaaaacggcttaatgactgcgtctatgaagattatt
cgtccacgagttattaagcgctacactactttacttaatacacaaatgtatacgacgcgc
aaaaagtag
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