Gardnerella swidsinskii: K9E37_01075
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Entry
K9E37_01075 CDS
T08402
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
gsw
Gardnerella swidsinskii
Pathway
gsw00730
Thiamine metabolism
gsw01100
Metabolic pathways
gsw01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
gsw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
K9E37_01075 (thiC)
Enzymes [BR:
gsw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
K9E37_01075 (thiC)
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Paralog
GFIT
Motif
Pfam:
ThiC_Rad_SAM
TMP-TENI
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
UQA88786
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Position
253045..255702
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AA seq
885 aa
AA seq
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MTSNYPYASMRNQFNLSACFIADPQACNNRPLTDIVDDALRAGATFIRLHCNNENAKEIT
TIARDIAQIIEDNNKCDSVTFVIDERVDVVWQARNQSIKVDGVHLAQSDMEPREARALLG
EDAVIGLSVETESLVKVINELPDGCIDYICVTAMRNPEEGCESTTAAYELEANHTTLDEA
KINTICSASDFPVLVGGRTALDDIDTIAHTKAAGWFVSEALYSSETPESTMREFVEHWKA
VRGEEKHGYAKRVIVAENSESKSSETQEKKPTFINAKEAKDAAKLAKQQRVDVAARGCTQ
RDKAHIRKTTPVHFEYEYGSYDLEVPYTEIKLSDTPGVGPNPPFKDYNTEGPKCDPKEGL
APLRLDWIRDRGDVVEYEGRRRNLQDDGKRAIKRGKASKEWRGRTHKPMKGADHPITQMW
YARHGITTPEMQYVATRENCDVELVREEVAAGRAVIPCNINHPEAEPMIIGSRFLTKLNA
NMGNSAVTSSIDEEVEKLTWATKWGADTVMDLSTGNDIHTTREWILRNSPVPIGTVPMYQ
ALEKVEDDASKLSWELFRDTVIEQCEQGVDYMTIHAGVLLRYVPLTANRVTGIVSRGGSI
MAEWCLQHHQESFLYTHFEELCEIFAKYDVAFSLGDGLRPGSLADANDAAQLSELMTLGE
LTKIAWKHDVQVMIEGPGHVPFDTVRMNIEMEKAICQNAPFYTLGPLTTDTAPGYDHITS
AIGGVEIARYGTAMLCYVTPKEHLGLPNKDDVKQGVIAYKIACHAADLAKHHPHAMDRDN
AISKARFEFRWLDQFNLSYDPDTAIAFHDETLPAEPAKMAHFCSMCGPKFCSMAISQNIR
KRFGGAAQQEQLVEEARSQAIADGMKEMSKKFQESGSSLYQSVKA
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgaattatccgtacgcatcaatgcgtaatcaatttaatctaagcgcctgcttt
attgcagacccacaagcttgtaataatcgtccgcttaccgatattgtcgatgatgctttg
cgcgctggagcgacttttattcgtcttcattgcaacaatgaaaacgctaaagaaatcact
actattgcacgcgatattgcacaaatcatcgaagacaataacaaatgcgattctgtaact
tttgttatcgacgagcgtgttgatgtcgtttggcaagctcgcaatcaaagcatcaaagtt
gacggagtgcatttagcacaaagcgacatggagcctagagaggctcgcgctcttcttggc
gaagatgctgtaatcggcttatctgttgaaaccgaaagcttagttaaagtaataaacgaa
cttccagatggatgcattgattacatttgcgtaacagcaatgcgcaatcctgaagaagga
tgcgaaagcactactgccgcttacgaattggaagcaaatcacacaacgctggacgaagcg
aaaattaatacgatttgttccgcaagtgattttccagttctagttggcggaagaactgca
ctcgacgatatcgatacaatcgctcacaccaaggctgcaggatggttcgtttctgaagca
ttgtattcttcagaaacaccagaatcaactatgcgtgaatttgttgaacattggaaagct
gtgcgaggtgaagaaaagcacggctacgctaagcgagtgatagttgcagaaaattctgaa
tcaaaatcttcagaaactcaagaaaagaagccaacttttattaatgcgaaagaagcaaag
gatgctgcgaaattagctaaacaacagcgagttgacgttgcagctcgcggatgcactcag
cgcgataaagctcatattcgcaaaacaactccagttcattttgagtatgaatatggttct
tatgatttggaagttccttatacggaaattaagctttcggatactcctggcgtaggtcct
aacccgccttttaaggattacaatacagaaggtccaaagtgcgatccgaaggaaggtttg
gctccgcttcgccttgactggattcgcgaccgcggtgacgttgtggaatatgagggtcgc
aggcgcaatcttcaagacgacggcaagcgcgcaattaagcgtggtaaggcttctaaggaa
tggcgtggacgcacgcataagccaatgaagggcgcggatcatccgattacacaaatgtgg
tacgctcgccacggaatcactactccggaaatgcaatatgttgcaacgcgcgaaaattgc
gatgtagagctggttcgcgaagaagttgcagccggacgtgctgtaattccttgcaatatt
aaccatcctgaagctgaacctatgattattggctcgcgcttcttgactaagctcaacgca
aacatgggtaattctgctgttacgtcatctatcgacgaagaagtagaaaagcttacgtgg
gccacgaagtggggtgcggataccgttatggatctttccaccggtaacgatattcacaca
acgcgcgaatggattttgcgcaactcccctgtgccaattggaacagtgccaatgtatcag
gctttggaaaaggttgaggatgatgcttctaagctcagctgggagcttttccgcgacact
gttattgagcagtgcgagcagggcgttgactacatgactattcacgctggcgtgcttctt
cgctacgtgccgcttactgcaaaccgcgtaaccggtattgtttctcgtggtggctcaatt
atggctgaatggtgcttgcaacatcatcaagagagcttcttgtatacgcactttgaagaa
ttatgcgagattttcgcaaagtacgatgttgcattctctttgggtgatggtttgcgtcca
ggtagcttggctgatgctaacgatgcggctcagctttccgagcttatgacgcttggcgag
cttacgaagatcgcttggaagcatgacgtacaggtgatgattgaaggtcctggtcacgtg
ccattcgacactgtgcgtatgaatattgagatggaaaaggcaatttgccagaatgctcca
ttctatacgcttggtcctttgactacggataccgcacctggctatgaccacattacttcc
gcaattggtggcgtggagattgcgcgatacggcaccgcaatgctttgctatgtgactcct
aaggaacatttggggttgcctaacaaggatgacgtgaagcaaggcgtgattgcgtataag
atcgcttgccacgcagctgatcttgctaagcatcatccacatgctatggatcgcgacaac
gcaatcagtaaggctcgctttgagttccgctggttggatcagttcaacttaagctatgat
ccagataccgcaatcgccttccacgacgaaacacttcctgcagaaccggcaaaaatggcg
cacttctgctcgatgtgcggaccaaagttctgctcgatggctatttcgcaaaatattcgt
aagcgttttggcggagcagctcagcaggagcagctcgttgaagaagcacgcagtcaggca
attgccgatggtatgaaagagatgagcaaaaagttccaagaatccggctcatcgttgtat
caaagcgtgaaagcataa
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