Gardnerella swidsinskii: K9E37_01195
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Entry
K9E37_01195 CDS
T08402
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
gsw
Gardnerella swidsinskii
Pathway
gsw00220
Arginine biosynthesis
gsw00240
Pyrimidine metabolism
gsw00250
Alanine, aspartate and glutamate metabolism
gsw01100
Metabolic pathways
gsw01110
Biosynthesis of secondary metabolites
gsw01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
gsw00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
K9E37_01195 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
K9E37_01195 (carB)
00220 Arginine biosynthesis
K9E37_01195 (carB)
Enzymes [BR:
gsw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
K9E37_01195 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
GARS_A
ATP-grasp_4
ATPgrasp_Ter
ATP-grasp_2
RimK
Motif
Other DBs
NCBI-ProteinID:
UQA88809
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Position
complement(287202..290597)
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AA seq
1131 aa
AA seq
DB search
MPKRTDIKSVMVIGSGPIVIGQAAEFDYSGTQACRVLREEGIRVILVNSNPATIMTDPEL
ADATYIEPIDTSILERIIAKERPDALLPTLGGQTALNAAMDLGRAGILEKYNVELIGASL
EAIDRGEDRELFKKVVEKAGAESAKSFIAHSIEEVDKIVETLGYPVVVRPSFTMGGLGSG
IAHNEEELHRIAGAGIHYSPTNEVLIEEGIEGWKEFELELMRDAKDNVVVVCPIENVDPV
GVHTGDSITVAPCFTLTDREYQKMRDIGIAIIRGVGVDTGGCNIQFAINPQTGRIIVIEM
NPRVSRSSALASKATGFPIAKIATKLALGYTLDEIQNDITRSTPASFEPTIDYVVTKIPR
FAFEKFPGADTTLTTSMKSVGEAMALAGNFQESLGKAMRSIDKRHACFSWDGERPSKEEV
NKLLEEMHTPTEHRYLQIQRALWGGATPDQIFVATKIDPWFVEQLAQINETALAVREAET
LTPKVLKRAKLAGLSDVQIAHLRNLGDEGENMVRELRWAYGLRPVYKTVDTCAAEFDAAT
PYYYSCYADESELKKRDREAVIILGSGPNRIGQGIEFDYTCVHAVQELGKDYDTIMVNCN
PETVSTDYDMSDRLYFEPLTFEDVLEIYEAEKKLGPVKGVIVQLGGQTPLSLAARLKAAG
VPILGTTPEAIDLAENRELFGEVLRQEGMNAPRYGTALSLEEAKDAAHAIGYPVLVRPSY
VLGGRGMEIVYDDAQLAKYVDRALDEARADTVVSGRLPSPLLIDKFLQDAIEIDVDALYD
GNELYIGGIMEHVEEAGVHSGDAACTLPPSTLSDDQIRRLREGTLSIARGCSVRGLINVQ
YAFMANTLYVIEANPRASRTVPFASKATGVALAKAAARIMAGETIAQQRKRGLLLPQGDG
GDIHPGQQVAIKASVLPFKRFRTPVGRTVDILLGPEMRSTGEVMGFDRDFPHAFAKSQLA
AYKGGLPTSGNVFVSVSDADKRQLPLLAVRLVELGFTIWATEGTASVLRRYGIDSVIVDK
LSSQGDTAKDMPNSEKAHERIGKNVVELIENGKIDMVLNTPNSRGSRTDGYAIRAAAVAA
DLPQFTTITEFAPVLMAIEAVKNNDYQVMSIQEHAQQLFAIEQAESQESRA
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtactgatattaagtcggttatggtaattggttccggcccgattgttatt
ggtcaggctgcagagtttgattattccggaacgcaggcttgccgagttcttcgcgaagaa
ggcattcgcgtaattttggtcaactctaacccggctacgattatgaccgacccggaactt
gcggacgcaacatatattgagccaattgacacttcgattttggagcgaattattgcaaag
gagcgtccggatgcgcttcttccaacgcttggtggtcaaactgcacttaatgctgcaatg
gatttgggtcgtgcaggaatcctagaaaaatataacgttgagcttattggcgcttctttg
gaagcaatcgaccgtggcgaagaccgagagcttttcaaaaaagtcgttgaaaaagccgga
gctgagtcagcaaaatcctttattgctcactcgattgaagaagtagacaaaattgttgaa
actttaggatacccggtagtagtacgtccaagcttcacaatgggcggcttgggctctggt
attgctcataacgaagaagagcttcaccgcattgcaggagccggcattcactattctcca
acaaacgaagtgcttattgaagaaggcattgaaggctggaaagagtttgagcttgaactt
atgcgcgacgcaaaagataacgtcgtagttgtttgcccaatcgaaaacgtcgatcctgta
ggcgtgcacactggcgactcgattacagtagctccttgctttacgcttacagaccgcgag
tatcagaagatgcgcgatattggtatcgctattattcgaggcgttggcgttgacaccggt
ggttgcaatattcagttcgcaatcaaccctcaaactggtcgcattatcgtcatcgaaatg
aacccgcgtgtgtctcgttcttccgcgctcgcatctaaagcaactggcttcccaatcgca
aaaatcgcaacgaaacttgctttaggctacactttggatgaaattcaaaacgatattacg
cgttcaactcctgcaagcttcgagccaacaatcgactatgttgtaacgaagattccgcgc
tttgctttcgaaaagttcccaggagcagacaccacgcttacaacttctatgaagtcggtt
ggcgaagcaatggctttggctggaaacttccaggaatcccttggaaaagcaatgcgctca
atcgacaagcgtcacgcgtgctttagctgggatggcgagcgtccaagcaaggaagaagtt
aataagcttcttgaagaaatgcatactccaaccgagcatcgctacttgcaaatccagcgc
gcgctttggggtggagcaacgccagatcaaatttttgtagcaacaaaaatcgacccttgg
tttgtagagcagctggctcaaattaacgaaactgcgctcgcagttcgtgaagctgaaacc
ttaactcctaaagttttgaagcgtgctaagcttgctggtctttcggacgtgcagattgcg
catttgcgtaatcttggcgacgaaggcgaaaacatggttcgtgagcttcgttgggcttac
ggtttgcgccctgtttacaagactgttgacacttgcgcagctgagttcgacgcagcaact
ccgtactactattcttgctacgctgacgaaagcgagttgaagaagcgcgatcgcgaagct
gtgattatccttggctctggtccaaacagaatcggccagggtattgagtttgattacact
tgcgttcacgctgttcaggaattgggcaaggattacgacaccattatggttaattgcaat
cctgaaacagtttctacagattacgacatgtctgaccgcctttactttgagcctcttact
ttcgaagatgtgcttgaaatttacgaagcagaaaagaagcttggacctgttaagggcgtg
attgtgcagcttggtggccaaacgccactttcgcttgctgctcgtcttaaagctgcagga
gttccaattttgggaacgactcctgaggctatcgatttggctgaaaatcgtgagcttttc
ggcgaagttcttcgtcaagaaggcatgaacgctcctcgatacggcacagctttaagcctt
gaggaagcaaaagatgcagctcacgcaatcggctacccagttcttgtgcgtccaagctac
gtactcggcggtcgcggaatggagattgtgtacgacgacgctcagcttgcaaagtatgtt
gatcgcgcattggatgaagctcgagcagacactgttgtttctggccgcttgccttcgccg
cttttgattgataagttccttcaggacgctattgaaattgatgttgacgcgctttacgac
ggcaacgagctttatattggcggcattatggagcatgttgaggaagctggcgtgcactct
ggtgacgctgcttgtactcttcctccaagcacgctttcggacgatcaaattcgccgcctt
cgcgaaggcacgctttcgattgcgcgcggctgctcagttcgcggtctgattaacgtgcag
tacgcttttatggcaaacactttgtatgtaattgaagcaaatcctcgagcgtctcgtact
gttccgtttgcttctaaagctactggtgttgctcttgctaaagctgctgctcgaattatg
gctggtgaaacaattgcacagcagcgcaagcgtggacttcttcttccgcaaggcgatggt
ggtgatattcatccaggtcagcaagttgctattaaagcttctgtgctgccgttcaagcgt
ttccgcactcctgttggtcgtacggttgatattttgctcggaccagaaatgcgttctacc
ggcgaagttatgggcttcgatcgtgacttcccacatgcttttgctaagagccagcttgca
gcatacaagggtggtttgcctaccagcggcaacgtgtttgtgtctgtaagtgatgcagat
aagcgtcaacttccgcttcttgcagtgcgattagtggagcttggttttacgatttgggct
actgaaggtacagcttctgtgcttcgtcgttatggtattgattccgtgattgtcgataag
ctttctagtcagggcgacacggcgaaggatatgccaaatagtgagaaagcacatgaaaga
atcggtaagaatgttgtagagcttatcgaaaatggtaagattgatatggtattgaatacg
ccgaattcaaggggatcgcgcactgatggttatgccattcgtgcagcagctgtagcagct
gatcttccgcaattcactactattaccgaattcgcaccagtattaatggctattgaagct
gttaagaacaacgattatcaggtgatgagcatacaagaacatgctcagcagttgtttgca
attgaacaggcagaaagtcaagaaagtcgggcttaa
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