Gardnerella swidsinskii: K9E37_01350
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Entry
K9E37_01350 CDS
T08402
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gsw
Gardnerella swidsinskii
Pathway
gsw00061
Fatty acid biosynthesis
gsw00071
Fatty acid degradation
gsw01100
Metabolic pathways
gsw01212
Fatty acid metabolism
gsw02024
Quorum sensing
gsw04146
Peroxisome
Module
gsw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gsw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
K9E37_01350
00071 Fatty acid degradation
K9E37_01350
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K9E37_01350
09145 Cellular community - prokaryotes
02024 Quorum sensing
K9E37_01350
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gsw01004
]
K9E37_01350
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsw04147
]
K9E37_01350
Enzymes [BR:
gsw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
K9E37_01350
Lipid biosynthesis proteins [BR:
gsw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
K9E37_01350
Exosome [BR:
gsw04147
]
Exosomal proteins
Exosomal proteins of breast milk
K9E37_01350
Exosomal proteins of breast cancer cells
K9E37_01350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Antimicrobial_7
GlutR_dimer
BPL_C
Motif
Other DBs
NCBI-ProteinID:
UQA88837
LinkDB
All DBs
Position
complement(332618..334429)
Genome browser
AA seq
603 aa
AA seq
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MQEYSRPLDESIDTDVNVFSLLEERAERNPNGSLVEYVGADGVWKSYTAQEFRDKVIAVA
KGFIARGVMPGDAVSIIAHTSWQWTILDMAIMSIGALTVPIYETSSSLQIQHIVQDSQVC
SIFVESPEMLPKVEAVQEECPTLHDVYVMNRGAIDACIEYGKAVTDAEFYERVHAVNGSD
IATIVYTSGSTGEPKGIELTHSNFVFIAKSGVISMPDIALKGSPRLLLFLPLAHVFARFM
QLFCFAGNITLGLTSNLKTVLSDFQTFKPTFILGVPRIFEKIYNAASQKAGRGVKGFIFA
YASKVAREWSRAQQSSSMVPPMLALSHSICKKLVYAPLLHVFGGSVSYAISGGAPLDLSI
AHFFNGIGLPLLEGYGMTETCAPSMVNPTTGYRIGTVGLPVKGVSVAIADDGELCIKSPA
VCRGYHNNPELTKQQIVNGWLHTGDFGSLDDDGFVRITGRKKDLIITAGGKNLSPNALEA
SLMSSPIISQAVVIGDRKPFVSAIIALDLSEVNTWLSSRGACPVRSLKEASHNGIVRAEV
ERAVSKANELVSRAESIRKFEIVPDEFTQANGLITPSLKARRQVVVERYNDLIEHVIYAP
RKR
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaatattctcgtccacttgatgagtctattgatacagatgttaatgttttctca
ctgctagaagagcgagcagagcgcaatcctaatggttctttggttgaatacgttggagct
gacggcgtttggaagtcatatactgctcaagaatttagagataaagtaatagctgtcgct
aaaggctttattgctagaggggtaatgcctggtgacgctgtgtcaattattgctcacact
tcatggcaatggacaattcttgatatggctattatgtctataggcgcattgacagtgcca
atttatgaaacaagctcttcgttgcaaatacaacatattgttcaagattctcaagtatgt
tcaatatttgtggagtctcctgaaatgttgccgaaagtagaggctgttcaagaagaatgt
cctactcttcacgacgtatatgtgatgaatcgtggtgctatcgacgcgtgcattgaatac
ggtaaagcagtaactgatgctgaattttatgagcgagtgcacgctgttaatggaagtgac
atagcaacaattgtgtacacttcaggttcaactggtgagccaaaaggaattgaacttact
catagcaattttgtctttattgctaaatcaggtgttatttctatgccagacattgcgtta
aaaggcagcccgcgtcttttgctgttcttgcctcttgcgcacgtttttgctaggtttatg
caattgttctgctttgctggaaatataactcttggtttgacgagtaatttgaaaactgta
ttgtctgattttcaaacttttaaaccaacatttattcttggggttccacgcatttttgag
aagatttacaatgctgcttctcaaaaagcaggcagaggagtaaaaggttttatttttgct
tatgcatctaaggttgctcgcgaatggtctcgcgctcaacagtctagttcaatggttcct
ccaatgctcgctcttagccattcaatatgtaaaaaattagtgtatgctccactactacac
gtatttggaggctctgtttcatacgctatttcgggcggtgctcctttagatttgtcgatt
gcacacttctttaatggcattggtttgcctcttctagaaggctatggaatgacagaaact
tgtgctccttctatggtgaatcctacgacaggttatcgcattggtaccgttggtttgcct
gtaaagggtgtatctgttgctattgctgatgatggtgaattgtgtattaaaagtcctgca
gtgtgcagaggctaccataataatcctgagcttaccaaacagcagattgtaaatggctgg
ttgcatactggagattttggatctttagacgatgacggttttgtgcgtattacaggcaga
aagaaagatcttattattactgctggcggtaagaacttatctccaaatgcgttagaagct
tcattaatgtcttcacctattatttctcaagctgttgttatcggagacaggaagccgttt
gtttcagcaattattgcgctcgatttatcagaagtaaatacttggctttcttcgcgtggt
gcatgccccgtacggtctttaaaagaagcttcacataacggtattgtgcgagcagaagtt
gaacgtgctgttagcaaagcaaatgagctagtttctagagctgagtctattcgcaagttc
gaaatagttccagatgagtttactcaagcaaacggtttgattacgccaagtttaaaggcg
cgtcgtcaagttgttgtagagcgttataacgaccttatcgaacacgttatttatgctcca
cgcaaacgttag
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