Gardnerella swidsinskii: K9E37_02050
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Entry
K9E37_02050 CDS
T08402
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
gsw
Gardnerella swidsinskii
Pathway
gsw00230
Purine metabolism
gsw00240
Pyrimidine metabolism
gsw01100
Metabolic pathways
gsw01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
gsw00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
K9E37_02050 (nrdD)
00240 Pyrimidine metabolism
K9E37_02050 (nrdD)
Enzymes [BR:
gsw01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
K9E37_02050 (nrdD)
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
RecO_C
A2L_zn_ribbon
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-ProteinID:
UQA88955
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Position
complement(509525..511942)
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AA seq
805 aa
AA seq
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MQVLEETAVTSAENCTDDVVEVPVSRVQVEKRDGRVVDFDPLNIIMAIKAAFKDLGKEVG
PQEEQLIRNISDHIEAEIQDRYNGPAKIEDIQTLVEHSLIENHLYEVARCYTSYRLNRDI
DRAKATDINEAVNRLVNRDESLVRENANKDSNVYATQRDLLAGAVSKASAFSMLPHAVSN
AHMKGDIHFHDADYSPFTCMSNCSLPDFGDMLAKGFALGNAMMDSPKSIGTAATQVTQII
KDIAGAQYGGQTVNRADEMLEPYAKCDYDKNLAMAHAMIPDSTPIQVAKDMIDGLKAQEP
KNLHCLDRDPLPADTPFDENLSELDQLREVYAKIMTRKAIYDAMQTMEYQINSNRVSNGQ
TPFVTVGFGLGTSWFAREIQRAILLNRIRGLGKDRHTAIFPKLVFTIKHGVNADAGDPNY
DLKQLALECSTKRMYPDVVFYENIVKITGSFKAPMGCRSFLQGWIDPKTGKDVEDGRMNL
GVVTVNMPRIALESHGDVTRFWKLFDERMEVAHQALRFRIMRCKQATPVNAPTLFRYGAF
GRLEANESVDQLFRNERATVSLGYIGLYETTAVFFGKDWMQDHSWNEEGKEFALSLVRRM
NKLCQQWSKAEGYHYSVYSTPAESLTDRFNRMDRQKFGRIEGVTDHDFYTNSFHYPVWLQ
PTPMEKLRYEVDFPYLASGGFINYCEFPCLQANPKALEAVWDYAYKIGIGYLGTNTPIDH
CFVCGFQGDFEPTKEGFRCPECGNSDPDKCNVTKRTCGYLGNPVQRPMVHGRHEEIAHRV
KHMSGETGHVTLNNGESREWYEETK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttttggaagaaactgctgtcacaagcgcagaaaattgtacggatgatgtagtt
gaagttccagtttctcgcgtgcaggtcgaaaagcgcgatggtcgcgtagttgattttgat
ccgctgaatatcattatggcaatcaaggctgcttttaaggatttgggcaaggaagtcggt
ccgcaagaagagcagttgattcgtaatatttctgatcatattgaggctgaaattcaagat
cgttacaatggcccggcgaagattgaagatattcagaccttggttgagcatagtcttatt
gaaaatcacctttatgaggttgctcgttgctacacgagctaccgactgaaccgagatata
gaccgcgctaaagctactgatatcaacgaggctgttaaccgtcttgtaaatcgtgatgag
tctcttgttcgtgaaaacgcaaataaggattctaatgtttatgcaactcagcgtgatctt
cttgcaggtgctgtttctaaagcttctgcgttctctatgcttcctcacgcagtttctaac
gctcatatgaagggtgatattcacttccatgacgctgattattcgccatttacttgcatg
agcaactgctcgcttcctgattttggcgatatgcttgctaagggatttgctcttggtaat
gcaatgatggatagtccaaagtctattggtactgctgcaactcaggttacgcaaattatt
aaggatattgctggcgcgcaatacggtggtcagactgttaatcgcgctgacgaaatgctt
gagccttacgctaagtgcgattacgacaagaatcttgctatggcacacgcaatgatccct
gattccacgccaattcaagtcgcaaaagatatgattgacggcttgaaggctcaggagcct
aagaatctccactgcttggacagggatccactgcctgctgatactccttttgatgaaaat
ttgagcgagcttgatcagcttcgtgaagtttacgcaaagattatgacgcgtaaggctatt
tacgacgctatgcaaacaatggaatatcaaatcaattccaaccgcgtttctaacggtcag
actccgttcgtaactgttggctttggcttgggtacttcttggtttgctcgtgaaattcag
cgcgctattttgcttaaccgtattcgtggtctcggcaaagatcgtcatactgcaatcttc
cctaagcttgtgtttactattaagcacggtgttaacgcggacgctggcgacccgaactac
gatttgaagcagcttgcgcttgagtgctctacaaagcgcatgtacccagacgttgtgttc
tacgagaatattgtgaagattactggctccttcaaggctcctatgggttgccgttcgttc
cttcagggttggattgatccaaagaccggcaaggacgttgaagatggccgtatgaatctt
ggcgttgtaactgttaacatgccacgtattgctcttgaatctcacggcgatgtgactcgc
ttctggaagcttttcgacgagcgtatggaagtagctcaccaagctttgcgattccgtatt
atgcgttgcaagcaggcaactcctgtaaatgctccaacgctgttccgttacggtgctttt
ggtcgtttggaagctaacgagagtgtggatcagttgttccgtaatgagcgcgcaactgtt
tctcttggctacattggtttgtacgaaactacggccgtgttcttcggcaaggattggatg
caagatcacagctggaatgaggaaggcaaggaatttgcgctttctttggttcgccgcatg
aataagctttgccagcagtggtcaaaggctgaaggctatcattactccgtttactcaact
cctgctgagtctttgactgaccgctttaaccgcatggatcgccagaagttcggtcgcatt
gaaggcgtaactgatcacgacttctacactaattccttccattacccggtttggttgcag
ccaactcctatggagaagcttcgctacgaggttgacttcccgtatcttgcttccggcggt
tttattaactactgcgagttcccatgcttgcaggcaaatcctaaggctttggaagctgtt
tgggattacgcttacaagattggcatcggctacttgggtacgaatacgccaatcgatcac
tgcttcgtttgtggattccagggtgattttgagccgactaaagaaggcttccgttgcccg
gagtgcggcaacagcgacccagataagtgcaatgtgactaagcgtacttgcggttacttg
ggcaatcctgttcagcgtccaatggttcacggtcgtcacgaagaaatcgctcaccgcgta
aagcacatgtctggcgaaactggccatgtgactcttaacaacggtgagtctcgtgaatgg
tatgaggaaacaaaataa
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