Gardnerella swidsinskii: K9E37_02775
Help
Entry
K9E37_02775 CDS
T08402
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gsw
Gardnerella swidsinskii
Brite
KEGG Orthology (KO) [BR:
gsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsw03032
]
K9E37_02775 (topA)
03400 DNA repair and recombination proteins [BR:
gsw03400
]
K9E37_02775 (topA)
Enzymes [BR:
gsw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K9E37_02775 (topA)
DNA replication proteins [BR:
gsw03032
]
Prokaryotic type
DNA Topoisomerases
K9E37_02775 (topA)
DNA repair and recombination proteins [BR:
gsw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K9E37_02775 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UQA89075
LinkDB
All DBs
Position
complement(734061..736907)
Genome browser
AA seq
948 aa
AA seq
DB search
MAAQNKLVIVESPTKARKIGGYLGNGYTVMASVGHIRDLAQPSQVPASRKAAFGKFGVDV
DHGFAPYYVVGSDKKKTVSDLKSALAKADELYLATDEDREGEAIAWHLVEALKPTVPVKR
MVFHEITKDAIQASLSNTRNVDDNMVDAQETRRVLDRLYGYELSPVLWRKVGPGLSAGRV
QSVATRLIVERERERMAFTKASYWDISAVLSSKGSDGENVDFEARMSELSGRRLAGSKDF
NSKGELVSTKDESQKALHVDADFASKLSKALENSDFVVDSMETKPYRRRPLPPFTTSTLQ
QTAGNRLSMSSRQTMRAAQSLYENGYITYMRTDSVTLSKEAIEAARSAARAAFGDEYVSQ
SPKQYATTSAGAQEAHECIRPAGARFLSPDELADKLPADQLKLYTLIWQRTLASQMADAT
GFTATVKLNASAGEYGEALFQASGTVITFAGFMKVFGNAHATEGESDKALPQMQAGDVLE
AKSVSADSHETQSPARYTEASLVKTLEAKEIGRPSTYATIISTIIDRGYVYERGRALIPS
WLAFAVIKLLEANFPKYVDYAFTADMENGLDRIAHGEETGRDWLTRFYFGSGEGAANSAD
EAHIGLQQQVAELGEIDAREINTIDIGDGLHVRIGRYGPYLEDIKNLDAEGNPRHASLPE
TLAPDELTVDAARELLENNAEGPRVLGVDPETGGNVEVRNGRFGPYVALVEEQDNAEDSK
SSKASKARPKMASLFKTMDPATLTLQEALQLLNLPRLVGEYEEVDAEGVVKLARIEANNG
RYGPYLTKTYSAVDTSAGETVESKPDTRSLSSEDAIFTVTLQEAKDLFAQPKYVKRTRGA
AKPPLRELGADPETGKPVVIKDGFYGAYITDGETNRTLPKQYTPESIDPQDAFALLAQKR
AAGPVKRKKRATKSTAKSSEKKSTAKKSIAKKTSTKKTTSKKSTAKKA
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacagaataagctagtcattgtggagtctcccacgaaagcgcgaaaaattggc
gggtatttaggaaatggctacaccgtcatggcttcagttgggcatattcgcgatctcgct
cagccaagccaagttccagcctcacgcaaagcagcgtttggcaagtttggtgtagatgtc
gatcatggttttgcgccatattacgtagttggctcagataaaaagaaaactgtttccgat
ttaaagtctgcgctcgcaaaagctgacgaattatatctggcaactgatgaggatcgcgaa
ggtgaagctattgcgtggcacttggtagaagcgttgaagccaactgtgccagtaaagcgt
atggtgtttcatgagattactaaggatgcaattcaagcctcgcttagtaatactcgaaat
gttgacgacaatatggttgatgcgcaagaaactcgtcgtgtgttagaccgtttgtatgga
tatgagctttctcctgttttgtggaggaaagttggtcctggtctttctgctggacgcgtg
cagtctgttgctactaggttgattgttgagcgcgaacgcgagcgtatggcgtttactaag
gcgtcttactgggatattagcgcggttttaagttctaaaggctcagatggcgaaaatgtt
gattttgaagcgcgcatgagcgagctttctggtcgtcgtttggctggttctaaagatttc
aattcaaaaggtgagttggtctctacaaaagatgaatcacaaaaagctttgcatgttgat
gctgattttgcatctaagctttctaaagctcttgagaattcagattttgtagttgactct
atggaaacgaagccgtatcgtcgtcgtcctttgccaccttttactacatcaactttgcag
caaactgctggaaaccgactttcaatgagctctcgccaaactatgcgagctgcacaatct
ctatacgaaaacggctatatcacttacatgcgtacggattccgtaacgctttccaaagaa
gctatcgaagctgcgcgtagtgctgctcgtgcagcatttggcgacgaatatgtttcgcaa
tctcctaagcagtacgcaactacgtctgcaggagcgcaggaagctcatgaatgtattcgc
cctgctggagcgcgtttcttaagcccggacgagcttgcagataaattacctgcggatcag
ctaaaattgtatacgcttatttggcaacgaacccttgcgtcacaaatggctgatgctaca
ggttttacagcaactgttaagttaaatgcttctgctggagaatatggagaagctttgttc
caagcttctggaacagtaattacttttgctggttttatgaaggtttttggcaatgctcat
gcaactgaaggtgaaagcgataaggcacttcctcaaatgcaagctggggatgttcttgaa
gctaaaagtgttagtgcggattctcacgaaactcagtctcctgcaagatatactgaagct
tctttagttaaaactttggaagctaaggaaataggacgcccttctacttacgcaacgatt
atttctacaattattgatcgcggatacgtgtatgagcgtggacgtgcgttaattccttct
tggcttgcttttgctgtaattaaacttttggaagcgaatttcccaaagtatgttgattac
gcgtttactgctgatatggaaaatggtttggacagaattgcgcatggtgaagaaaccggt
cgcgattggctaactagattctatttcggttccggtgagggtgctgctaattctgctgat
gaagctcatattggtttgcaacagcaggttgcagagcttggtgaaattgatgcgcgtgaa
ataaataccatagacattggcgatggtttgcatgtgcgtattggacgctatggtccgtac
ttggaagacattaagaatcttgatgctgaaggcaaccctcgtcatgcttctttgccagaa
actttagctccagatgagttaactgttgatgctgctcgagaattgcttgagaataatgct
gaaggtccacgtgtgcttggagtagatccagaaacgggtgggaacgtagaagtgcgcaat
ggtcgttttggtccgtacgtggcactggtagaagagcaggataacgcggaagattctaag
tcttctaaggcttctaaagctcgtccaaaaatggcttctttgtttaaaaccatggatcca
gcgactttgactttgcaagaagcgttgcaactcttgaatttgccacgtttggttggtgag
tatgaagaagttgatgccgaaggcgttgtaaaactagctcgtatcgaagcaaataatggt
cgttacggtccatatttaactaaaacatattctgctgtagatacttctgctggagaaact
gtggaatctaagccggatacgcgatccctttctagtgaagatgctatttttactgttact
ttgcaagaagcgaaagatttatttgcgcaaccaaagtacgttaagcgtactcgtggtgcc
gccaagccgcctcttcgtgagcttggcgcagatcctgaaactggaaagccagtagtgatt
aaggatggtttctacggagcttatattactgatggtgaaacgaatcgcactttgccaaag
cagtatacgcctgaatcgattgatccgcaggatgcgtttgcacttttggcgcaaaagcgc
gccgcaggtcccgtaaaacgcaaaaagcgcgcgactaagagcactgcaaaatcttctgaa
aagaagtctactgcgaaaaaatctatcgcaaagaaaacttctacaaagaagactacttca
aagaaatctaccgctaaaaaagcatag
DBGET
integrated database retrieval system
