Gardnerella swidsinskii: K9E37_02945
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Entry
K9E37_02945 CDS
T08402
Name
(GenBank) glycoside hydrolase family 13 protein
KO
K01208
cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:
3.2.1.54
3.2.1.133
3.2.1.135
]
Organism
gsw
Gardnerella swidsinskii
Pathway
gsw00500
Starch and sucrose metabolism
gsw01100
Metabolic pathways
gsw01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gsw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
K9E37_02945
Enzymes [BR:
gsw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.54 cyclomaltodextrinase
K9E37_02945
3.2.1.133 glucan 1,4-alpha-maltohydrolase
K9E37_02945
3.2.1.135 neopullulanase
K9E37_02945
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
TFIID_NTD2
Motif
Other DBs
NCBI-ProteinID:
UQA89105
LinkDB
All DBs
Position
complement(778815..780194)
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AA seq
459 aa
AA seq
DB search
MSIPQWLPDARFYQIFPDRFHRCEGYGILTEGHVPLDPWDAEPTRENFLGGNIAGITEKL
DYIHDLGCNALYLNPIFSAATNHRYDANDYFKIDPLLGTLEDFHTLVDEAHKRNIRIVLD
AVLNHCGKTHWMFQDVVKNEENSEYVNYFSVKNFPVKSLPVPNYKTCSGCEYLPKWNVFN
PKVREHHFNVARYWIDQGIDGYRLDVPYFIYPEFWQDFRQVVKAKNSELCLIAEEWRDPA
QWLQGDTTDSTMNYTLRDLVLGFTATKRFNAYDFVNGINRLQERIPYGYHHGMMNLLGSH
DTERVLTAHQNNTEDCITAYYCMFACEGAPMIYYGDELGMVGDNDPGCRSGMQWDSLDAN
AEIFRTIVQLNALRRDHIALRRGTQSCYAVDEDTVIISREHKEESLLMIISRNNLVEYNS
SKLPQQLQNHNWRIINGVTVGNSWRPNKDNSMIVLQAQQ
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtctataccacagtggttgcctgatgcaagattttatcagatttttcctgatcgtttc
catcgttgtgaaggctacggtatactaactgaaggtcatgtgccgcttgatccatgggat
gctgagcctacgcgtgagaatttcttaggtggtaatattgctggaattacagaaaaactt
gattatattcatgatttaggttgcaatgcgctctatttgaatccaattttttctgctgca
acaaatcatcgttatgatgcaaacgattattttaaaatcgatccacttttaggaactctt
gaagatttccatacattagtagatgaagcgcataagcggaatatacgtatagtactagat
gcagttttaaatcattgtggtaaaactcattggatgtttcaagatgttgttaaaaatgaa
gagaattcagaatatgtgaattatttttcagtgaaaaacttcccagttaagtcattgcct
gtgcctaattataaaacctgttctggttgtgaatatctaccgaagtggaatgtgtttaat
ccaaaggtgcgtgagcatcattttaatgttgcaagatattggatcgatcaaggtatcgat
ggttatcgtcttgatgttccatattttatttatccagaattttggcaggactttaggcaa
gttgttaaagcaaaaaattcggaattatgtttgatagctgaagagtggagagaccctgct
caatggttgcaaggagacactactgatagcacaatgaattatactctgcgtgatttagtt
ttaggttttaccgcgacaaagcgattcaatgcatacgattttgttaacggtattaaccgt
ttgcaggagcgcataccgtatggatatcaccatggaatgatgaatttgttgggtagtcac
gatactgagcgtgttttaactgcgcatcaaaataatactgaggattgcataaccgcgtac
tattgcatgtttgcctgcgaaggtgctccaatgatttattacggtgatgagcttggtatg
gttggcgataatgatccagggtgccgttctggtatgcagtgggatagtcttgatgcaaat
gctgaaatattccgtacaattgttcaattaaatgcattgcggcgtgatcatattgcgttg
cgaagaggcacgcaaagttgttacgctgttgacgaagatactgtcattatttctcgagag
cataaggaagaatctcttttgatgattatttcacgtaataatttggtagaatataattca
tcgaagctacctcaacaattgcaaaatcataattggcgaattataaatggtgtaactgtt
ggaaatagttggcgccccaataaagataattctatgattgtattgcaagctcaacagtaa
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