Gardnerella swidsinskii: K9E37_03290
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Entry
K9E37_03290 CDS
T08402
Name
(GenBank) penicillin-binding protein 2
KO
K05364
penicillin-binding protein A
Organism
gsw
Gardnerella swidsinskii
Pathway
gsw00550
Peptidoglycan biosynthesis
gsw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K9E37_03290
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gsw01011
]
K9E37_03290
Peptidoglycan biosynthesis and degradation proteins [BR:
gsw01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
K9E37_03290
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GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UQA88059
LinkDB
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Position
complement(864417..865883)
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AA seq
488 aa
AA seq
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MNKSLRELFTAVLVLFVILGISSTIITSIKANALNSDPRNRRALYHEFGAPRGAILTSDG
TVIVKSEPSKDAFVYQRQYSNGLVYAPVTGYFSISQRADRGIEASRNSLLSGESDALFWQ
RFRSLFTGATNRGASIETSIDSRLQNLAYNLLKGKDAALVAIEPKTGRIRAMVSTPSYDP
NDLALHNINEVNKSYERITSDVSNPMLNRAVSELYAPGSTFKTVVAAAALESGKYKPDTK
IPAGASYVLPGTKTSLTNVTYQANGVDGKISFEDALAYSSNTAFAQLGNSLGSDVIVKQA
RKFGFFDSLPIDGSDSTGFPIRSVKSTFSIKPTPDRLALESIGQGDAKVTPLQNAMIAAA
IANNGTLMKPTLVDCVRSSDLSVLSQTRPTVMNQVMSSDSASKLTSMMQAVVTKENPNLA
LPNIHVAAKTGTAQIGMYNQAANGWVIGFAPAENPRIAIAVIVHNTSTFGSYAAGPIMRQ
VMEEALKQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaagtcttagagaactttttactgcagtattggtactttttgtaatacttggt
atttcaagtacaattattacttctattaaagcgaatgctctaaattctgatcctcgaaat
cgcagagctttataccatgagtttggcgctccacgtggagcaatacttacatcagatggc
acagttatagtgaaatctgaaccatctaaagatgcttttgtgtatcaacgtcagtattct
aacggattagtatatgctccagttactggatatttttctattagccagcgtgcagataga
ggaattgaagcttctcgtaatagtttattaagtggagaatcagatgctctgttctggcaa
agattccgttcattatttactggagcaactaatcgcggagcttctatagaaacatcaatt
gattcacgtttgcaaaatcttgcttacaatcttcttaaaggcaaagacgcagctttagtt
gcaattgagccaaaaaccggaagaattcgcgccatggtaagcactccaagttatgatccg
aatgatcttgctcttcacaatattaatgaagtaaataaatcgtatgagagaataacatca
gatgtgtcaaatcctatgctgaatcgtgctgtttctgagctttatgctcctggctctacg
ttcaaaactgttgttgcagcagcagcattagaatctggaaaatacaagcctgatacgaaa
atacctgctggtgcgagctatgttttgcctggaaccaagacgtctcttacaaatgtcact
taccaagcgaatggcgttgatggaaaaatatcttttgaggatgctttagcatattcgtct
aatactgcttttgctcaattgggtaattctttaggatctgacgtaattgtaaagcaggca
agaaagtttggattcttcgattcgctgcctattgatggttctgattctactggattccca
atacgatccgtgaaatctactttttctattaagccaactccagatagactagctctggaa
tcaataggtcaaggtgatgctaaggttacacctttgcaaaacgctatgattgcggcagct
attgcaaataatggaacattgatgaagcctactcttgttgattgtgtaagatctagcgat
ttgtcagtattgtcacaaactagaccaaccgttatgaaccaagtaatgagtagtgacagt
gcatctaaattaacttctatgatgcaggctgttgttacaaaagaaaatcctaatcttgct
ttacctaatattcatgttgcggctaaaacaggtactgcacagattggaatgtataatcaa
gctgctaatggttgggttattggatttgctcctgctgaaaatcctagaatagctatagcg
gttatagtacataacacaagtacatttggtagttacgcggcaggacctattatgcgacaa
gtgatggaggaggcgcttaaacaatga
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