Gardnerella swidsinskii: K9E37_03730
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Entry
K9E37_03730 CDS
T08402
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gsw
Gardnerella swidsinskii
Pathway
gsw03030
DNA replication
gsw03430
Mismatch repair
gsw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K9E37_03730
03430 Mismatch repair
K9E37_03730
03440 Homologous recombination
K9E37_03730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsw03032
]
K9E37_03730
03400 DNA repair and recombination proteins [BR:
gsw03400
]
K9E37_03730
Enzymes [BR:
gsw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K9E37_03730
DNA replication proteins [BR:
gsw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K9E37_03730
DNA repair and recombination proteins [BR:
gsw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K9E37_03730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
RuvB_N
AAA_30
AAA_22
zf-CXXC
AAA_2
AAA_19
AAA_14
DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UQA88133
LinkDB
All DBs
Position
968110..970500
Genome browser
AA seq
796 aa
AA seq
DB search
MALALYRRYRPDTFDGVIGQDQVTIPLSRALDQGKITHAYLFSGPRGCGKTSSARILARC
INCEKGPTSHPCGECQSCKDLATGGAGSIDVVEIDAASHNGVDDARELRERAGFAPARDR
YKIFILDEAHMVTQQGFNALLKIVEEPPEHVMFIFATTEPDKVIGTIRSRTHHYPFRLVP
PEVMSPYLEDICKKEGILPQPGVLRLVMRAGAGSMRDTLSVLDQLMVGAVDGSISLDSAV
ALLGFTPNSLISEFIDDLINHDGASIYDVVRRVIVGGYDTRKFVEDLLGRVRDLLLMVSA
GPKAASSLLNDVSPEDLEILNKQSASMTLHDLARMAQTINDALSAMASAISPRMNLEILV
ARLLADSETSNTVATNLRINNVQQQNISTSKQNIQNKVSSGAHFVGSTSNKKYVSANSEN
NSTSNSSLPSETTASPIAKAETQSAPRTKEMESKKAFLNDAHNANAKNDSMDTDAMWDKV
VSKLPDDVREYVTREYVPTVQLTPVQSGRQRLILTFNEPMSQHAFALAVCTTSPYDGQKV
PKVVMNEVHEVFGAQVMIAPAPVAANGEQVESVARMDPQNLAKVKRDILLRKTGLSAGFS
NKTDSDGSGINKNPTKKESSGFSGADGSAASVASENTADELSDVANADDDVWADMSSMPM
SDVIAMPEDSSTKDSSIEDELMNHDDEIAIQKSSHSHNQSEAISGVLDQAKLHSQVQNAT
NTSELSTESIQTTVSPTNGATADECSMDDASLESATSVSTDELKQIFEVKSVEEFASTDP
KNPKNAIMSVKKKQEE
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggcacttgcactgtatcgtagatatcgtcctgacacgtttgatggtgttattgggcag
gatcaggttaccatacctttgtctagagcattagaccaaggaaaaataacgcatgcatat
ttattttctgggccgcgtggatgcggtaaaacaagttctgcgcgaattttagctcgctgc
attaattgcgaaaaaggaccaacttcgcacccatgtggagagtgccaaagctgtaaagat
ttagctactggcggtgccggttctatcgacgttgtagagattgatgctgcaagccataac
ggtgtcgatgatgctagagagttgcgtgagcgtgctggcttcgctcctgctcgtgaccgt
tataagattttcattctcgatgaagctcatatggttacgcagcaaggttttaacgctttg
cttaagattgtagaagagccgcctgagcatgtaatgtttatttttgctaccactgagccg
gataaagttattggcactattcgctcgcgtacacaccattatcctttcagacttgtgcct
ccagaggtaatgtctccatatcttgaagatatttgcaaaaaggaaggtattctgccacag
ccgggagttcttcgtcttgttatgcgcgctggtgcaggatcaatgcgagatacgttatct
gtgctcgatcagcttatggtgggtgctgttgatggttcaatttctttggattctgcggtt
gctttattaggttttacgcctaattcattgattagcgaattcattgacgatcttattaat
catgatggtgcttcgatatacgatgtagttcgtcgcgttattgttggaggctacgatact
cgtaagtttgtagaagatttattaggtagagttcgtgatttgttgcttatggtatctgca
ggtcctaaagcggcttcaagcttacttaatgatgtttctccagaagatttggaaatattg
aataagcaatctgcaagcatgacattgcatgatttagcacgtatggctcaaacaattaat
gatgctttaagtgcaatggctagtgcaatttctcctcgaatgaatttggaaattttagtt
gctcgtttgcttgcagacagcgaaacttcaaatactgttgcaactaatttgcgcatcaat
aacgtgcagcaacaaaatatttcaacttctaagcagaatattcaaaataaagtatcttct
ggtgctcatttcgtaggttctacaagcaataaaaaatatgtttctgcaaatagtgagaat
aatagtacttcaaattcttcgctaccttctgaaactacggcatctcctattgctaaagca
gaaacgcaatctgctccacgcacaaaagaaatggaatctaaaaaagcgtttttgaacgat
gcacataatgctaatgcaaagaatgattccatggatactgatgcaatgtgggataaagta
gtttcaaaattgcctgatgacgtacgtgaatatgtaactcgtgagtatgttcctacagtg
caacttactccagtacaatcaggtcggcagcgtcttattttgacttttaatgagcctatg
agtcaacatgcatttgcgctcgcagtatgcactacttctccatatgatgggcaaaaagtg
ccaaaagtagtaatgaatgaagtgcatgaagtatttggtgcgcaagtaatgattgctcct
gcaccagttgctgctaatggtgaacaagtagaatctgttgctcgaatggatccgcaaaat
cttgccaaagttaagcgagatattttattacgcaaaactggcctatctgctggatttagt
aataaaactgattctgatggcagcggaataaataaaaatcctactaaaaaagaatcttcg
ggttttagtggcgctgatggctccgcagcatcagtagcttctgaaaatactgcggatgag
ttaagtgatgttgcgaatgcggatgatgatgtttgggcagatatgtcgtctatgcccatg
tcggatgtgattgcaatgccggaagattcttctactaaagactcttctattgaagatgag
ctcatgaatcatgatgacgagattgcaatacagaagagttcgcattctcataaccaatct
gaagctatttctggtgtcttggatcaagctaaactacactctcaagttcagaatgcaact
aatacttcagaattgtctactgaatcaattcagactactgtttctcctacgaatggagct
actgctgacgaatgttcgatggatgatgcttcattagaatccgcaacgtctgtaagcact
gatgagcttaaacaaatttttgaagttaaatctgttgaagaatttgcttctactgatcct
aaaaatcctaaaaatgcgattatgagcgttaagaaaaagcaagaggagtag
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