KEGG   Gardnerella swidsinskii: K9E37_03925
Entry
K9E37_03925       CDS       T08402                                 
Name
(GenBank) type I restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
gsw  Gardnerella swidsinskii
Brite
KEGG Orthology (KO) [BR:gsw00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gsw02048]
    K9E37_03925
Enzymes [BR:gsw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     K9E37_03925
Prokaryotic defense system [BR:gsw02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   K9E37_03925
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 HSDR_N ResIII DEAD Rep-A_N
Other DBs
NCBI-ProteinID: UQA88166
LinkDB
Position
1012661..1015960
AA seq 1099 aa
MKIVLENQDSTVMSTFTPSARNDGNYQSEAQLEEEFINILQSQGYEYAHIHNEKDLIANL
RVQIEKLNDYHFSDGEWERFFKENIANSTDDIVKKTDAIQRDNVKILKKDDGTDKNITII
DKENIHKNIVQVINQYAVNANDNANNNDANGPARSNRYDVTVLVNGLPMVHIELKRRGVP
IREAFNQINRYARDSFWAGSGLFGYVQIFVISNGTETKYYSNSTRNNAYNEQKSKGSSKS
TTSNSFEFTNYWSDAQNTIISDLCDFAKTFFAKHVILNILTKYCVFNAEDCLMVMRPYQI
TAAENIVNRVKYMFANASKMPAAERQKGGYIWHTTGSGKTLTSFKTSQLVKALKDAEGNN
LVDKVLFVVDRKDLDYQTMREYDRFEKGAANSNTSTAVLTKQLEDNTEECRLIITTIQKL
SKFISNNPSHEIYKKRIVFIFDECHRSQFGGMHADIVKHFKNALLFGFTGTPIFEANAAG
SDAAHLSTTEQTFGPCLHTYTIINAINDKNVLPFRVEYVATVKTSSELEKATDELVKDIN
RPDVIRHKDRVHNVVQYIIEHFTQKTYRNEKTYKYKRIINVKELAADKHNTLETKKSSEE
VDINGFNSIFAVADIPLAKAYYNEFKKQQQNLPPSERLKVATIFSYAVNEGESDSSAYAN
GMGSLGEENSESTAKLDANSQEFLESAIKDYNEMFNTAYDASNNKFQNYYKDVSIRMKNK
EIDILIVVNMFLTGFDATTLNTLWVDKNLRMHGLIQAFSRTNRILNSVKTFGNIVCFRDL
SYQVDEAVALFGDKDAQGIVLCPTFEQIYNGYVDAKGIERCGYSDLVNELMEKYPLQGFN
IVGEENQKKFISLFGNILRLRNMLKAFDQFEGNEIIKERDMQDYLGHYQDLHEEWKRKEQ
KGDIANITDDVVFEMELVRQVEVNIDYILMLVEHYHSKHCKDKNVLASIRVAVDSSPQLR
SKKKLIEGFIAQLNENELGKLVDSEGNITVYDSNGNKLSIVDCWSEYVEKKYNHDLAQLV
QSEGLNDALTRKFMEKSFSAGEVSELGTDINDLMPRMSRFGAAAIARAEKKSRIVESMRN
MFNEFVGLIGFSQYDSQKD
NT seq 3300 nt   +upstreamnt  +downstreamnt
atgaaaatcgtgttagaaaatcaagatagcactgtaatgtctacgtttacgccaagcgcg
cgcaacgatggcaactatcaaagcgaagcgcaactcgaagaagagttcattaacattttg
caatcccaaggctacgagtatgctcacattcacaacgagaaagatcttatagcaaacctt
cgcgtgcaaatcgaaaagctcaacgactatcatttttcagatggcgagtgggaaagattt
ttcaaagaaaatattgcaaacagcactgacgatatagttaagaaaacagatgctattcag
cgagataacgttaaaatactcaaaaaagatgacggcacagataagaacataactattatt
gacaaagaaaatattcacaagaatattgtgcaagtaatcaaccaatatgctgttaacgca
aacgataatgcaaacaataatgatgcaaatggccctgcgcgtagcaatcgttacgatgtg
actgttctagtaaacggcttgccgatggttcatattgagctaaagcgcagaggtgtgcct
attagagaagcgttcaatcagattaaccgttatgctcgcgactcattttgggctggaagc
ggactatttggatacgtgcaaattttcgtaatctcaaacggcactgaaacaaagtattac
tccaactcaactcgcaataatgcgtacaacgagcagaaaagtaaaggatctagcaaaagc
acaacaagtaacagttttgaatttacaaactattggtccgatgctcaaaacactataatc
tccgacttatgcgattttgctaaaaccttctttgcaaagcacgtaattcttaacattctc
acaaaatattgcgtttttaatgcagaagattgcttgatggttatgcgtccataccagatt
actgcagcagaaaacatagtgaatcgcgtaaaatacatgtttgctaatgcgagcaaaatg
ccggcagcagagcgtcaaaagggcggatatatttggcatactactggatctggtaaaacg
ctaactagcttcaaaacatcgcagctagtaaaagctttgaaagacgcagaaggcaataat
cttgttgacaaagttttgtttgttgtagaccgtaaagatcttgactatcaaacaatgaga
gaatacgacaggtttgaaaaaggagccgcaaatagtaacacttcaacagctgtgcttaca
aaacagctagaagacaatacggaagaatgcaggcttattataaccactattcaaaagctt
agtaaatttataagcaacaacccaagtcatgaaatttacaaaaagcgcatagtgtttatt
tttgacgaatgccacagaagccagtttggaggcatgcatgcagatattgtaaaacacttt
aaaaatgctctgctttttgggtttactggcacgccaatttttgaagcgaacgctgctggc
tccgacgctgcgcatctttccacaaccgagcaaacctttggaccgtgcttgcatacgtac
acaatcattaacgcgattaacgataaaaacgtgttgccattccgcgtggaatacgttgct
actgtaaaaacgtcgagcgagctggaaaaagcaaccgacgaattggttaaagatattaat
cgaccagatgtaattaggcataaagatcgcgtgcataatgttgttcaatacattattgag
cattttactcaaaaaacgtatcgcaacgagaagacttacaaatacaagcgcattattaac
gttaaagaacttgctgcagataagcataatactttagagactaaaaaatcttctgaagaa
gttgacataaacggctttaattcaatctttgctgttgcagacattcctcttgcaaaagcg
tattacaacgagttcaaaaagcagcagcaaaatctgcctccaagcgaacgcttaaaagta
gcaactattttcagctatgcagtaaacgagggtgagtcagattcttcggcgtacgccaac
ggcatgggttctcttggagaagaaaattcagaaagcacggcaaagctagacgcaaattcg
caagaatttttggaaagcgcaataaaagactataacgaaatgtttaatactgcgtatgat
gcgtcaaataacaaattccaaaactattacaaagacgtttcaattcgcatgaaaaataag
gaaattgacattttgattgtagtcaacatgtttctaactggttttgatgcaacaactttg
aacacgctttgggtagataaaaatcttcgcatgcatgggcttattcaagcgttttcgcgc
acaaatcgaatcttaaattccgttaaaacatttggaaacattgtgtgctttagggatttg
agctatcaagttgacgaagcggtagctctttttggagataaagatgcgcaaggtattgtg
ctttgccctacgtttgagcagatttacaacggttacgttgacgctaaaggaattgagcgt
tgtggatacagtgatttagtaaatgagcttatggaaaagtatccactgcaaggcttcaac
attgttggagaagagaatcagaaaaagtttatatcgctttttggtaatattctgcgattg
cgtaacatgctgaaagctttcgatcaatttgaaggcaacgagataatcaaagagcgcgat
atgcaagattacttggggcattaccaggatttgcatgaagaatggaagcgcaaagagcaa
aaaggcgatattgcaaacattacggacgatgttgtgtttgagatggagcttgtgcgccaa
gtagaagtaaatattgactacattttgatgttagtagaacattaccatagcaagcattgt
aaggataaaaatgttcttgcctctattagggtggcggttgactctagcccgcagttgcgt
agtaaaaagaagcttattgaagggtttattgcgcagcttaacgagaatgagcttgggaag
cttgtggattctgaaggtaacattaccgtttacgattctaacggcaacaagttgagcatt
gttgattgctggagcgagtatgttgagaaaaagtataatcatgatttggcgcaactcgtg
caaagcgaaggattaaacgatgctttgactcgcaagtttatggagaaatcttttagtgct
ggcgaagtgagtgagcttggtacagacattaatgatttaatgcctagaatgagcagattt
ggcgctgcggcgattgcgcgcgctgagaagaaaagtcgcattgtagaaagtatgagaaac
atgtttaatgagtttgttgggcttattggcttttctcaatacgattcgcaaaaagattga

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