Gardnerella swidsinskii: K9E37_04575
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Entry
K9E37_04575 CDS
T08402
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gsw
Gardnerella swidsinskii
Brite
KEGG Orthology (KO) [BR:
gsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsw03016
]
K9E37_04575 (truB)
Enzymes [BR:
gsw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K9E37_04575 (truB)
Transfer RNA biogenesis [BR:
gsw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K9E37_04575 (truB)
Prokaryotic type
K9E37_04575 (truB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UQA88281
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All DBs
Position
1144038..1145141
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AA seq
367 aa
AA seq
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MCIPDSGLLLVDKPQGVTSHDIVACARHLLHTKRVGHAGTLDPMATGLLIIGFGNATRLL
NYMLGHNKTYEAVIRLGEATTTDDAEGEILPDNALNIGPGVHVDNDDTSFEKSLSFERIK
QVVSENLVGKIMQAPTAFSAIKINGQRAYDLAREGKSVEIAPREIFVSDFSVSNPRITRG
VSGKLVCDISAKVSCSSGTYIRALARDLGRLLGVGGHLTQLRRTSVGDFSVTDSRVLKLR
AQMREFTDRNGVLQHRSKAVPGDDFDANNMLPKICLNMMDAASHSLPTLSIDENQAKDLR
FGRWIELKSAINYENYPAIAYVPNANTAECDVVAVVELTKNIKSNQIKPIVVFPASEKTG
KLDKYLK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtgcataccagattcagggttactgcttgtagataagcctcagggcgttacaagtcac
gatattgttgcatgcgctcgtcatttgttgcatacaaagcgagttgggcacgcaggaacg
cttgatcctatggcaacaggattgctaatcataggttttggcaatgcaacgcgactttta
aattatatgttggggcacaataaaacctatgaagcagtaatccgcttaggagaagcaact
actactgatgacgcagaaggtgagattcttccggataatgcattaaatataggtccgggg
gttcatgtcgataatgacgacacgtcttttgaaaagtcactgtcttttgagcgaattaag
caagttgttagcgaaaatttagtaggcaaaattatgcaagctcctactgctttttctgct
attaaaattaatggtcaacgagcttatgatttagcgcgcgaaggaaaatcagtagagatt
gctcctcgagagatatttgttagtgatttttcagtaagtaatcctcgaattactagggga
gtgagtgggaaactcgtatgcgatatatccgcaaaagtttcttgcagtagtggaacatat
attcgcgctttagctcgcgatttaggtcgcttactgggagttggtgggcatcttactcag
cttcgtcgcacgagcgttggtgatttttcagttactgattcgcgtgttcttaaactccgc
gctcaaatgcgagaatttactgatcgcaatggagtattgcagcatcgctcaaaagcagtt
cctggtgacgattttgacgcaaataatatgcttcctaaaatttgcttaaatatgatggat
gcagcttcgcattcgcttccaactttaagcattgatgaaaatcaagctaaagacttgcgt
tttggacgctggattgagcttaaatctgccataaattacgaaaattatcctgcaatagcg
tacgttccaaacgcaaatactgcggaatgtgacgttgttgcagtagttgaattgacaaaa
aatataaaaagtaatcaaatcaaaccaattgtggtatttccggcaagcgagaagactggt
aaactagataagtatttaaaataa
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