Gardnerella swidsinskii: K9E37_04605
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Entry
K9E37_04605 CDS
T08402
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
gsw
Gardnerella swidsinskii
Brite
KEGG Orthology (KO) [BR:
gsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsw03400
]
K9E37_04605 (radA)
DNA repair and recombination proteins [BR:
gsw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K9E37_04605 (radA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
Rad51
AAA_22
AAA_30
AAA_16
SLFN-g3_helicase
NACHT
TniB
ABC_tran
AAA_24
NTPase_1
AAA
nSTAND3
AAA_29
EAD2
AAA_19
AAA_11
PAXNEB
DUF7129
Motif
Other DBs
NCBI-ProteinID:
UQA88287
LinkDB
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Position
complement(1151009..1152496)
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AA seq
495 aa
AA seq
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MASKSTLHYLCSECGWSGSKWYGRCPECGEWGTVNEFREARVSGLSRTTRTPRATTASRA
YSPDSITTSNRNSTHSTLDSATSAQPISEIQADDAMRIHTGFSEFDRVLGGGLVPGSVTL
IAGEPGIGKSTLLLKTAAYVSKQSKESNTPPVLYISGEESAAQVKLRASRINAVNDYLLL
ATTGDLDTVLDLIETHHPTLAIVDSAQTISAQEVDGITGGSTQVREVASALIDVAKANNI
PILLVGHVTKDGSIAGPRTLEHLVDTVCQFEGDTQTALRMLRAVKNRFGPTDEVGCFDMS
GEGIEEVPDPSGLFLSSTENDNQGKNAQDGTNDGTCVTFTLEGHRSLPIEIQALVTQSAL
PTPRRAVSGVDSNRLAMLTAVLYRHGRVNLLAKDLYVSTIAGALAKEPSCDLAIVAALAS
AAAGKAVTPKTCAIGEMSLTGQVRPVPRIEPRLREAARIGYKRAIVCHMRKNVNIPGLEI
IEVSTVREALKALGL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggctagtaaatctactcttcactatttatgttccgaatgcggttggagcggctcaaaa
tggtacggtcgctgccctgaatgtggcgaatggggcacagtgaacgagtttagagaagcg
cgagttagcggattatctcgtacaacacgtacaccgcgcgcaacaacagcatcgcgcgca
tattcaccagatagcataactacttctaatcgcaatagcacacattcaactctcgattca
gcaacatccgcgcaaccaattagcgaaattcaagcagacgacgcaatgcgcatccacact
ggttttagcgaattcgatcgcgtattaggcggaggacttgtgccaggctccgtaactctt
atagcaggagagccaggtatcggaaaatcaacactacttctaaaaacagcagcttacgta
tctaagcaatcaaaagaaagcaacactcccccggtattgtatatttccggcgaggaatca
gcagcacaagttaaattgcgcgcgtctagaattaacgctgtaaacgattatttattactt
gcaacaacaggcgatcttgacactgtgctggatcttattgaaacgcatcaccctacgctt
gctattgtcgattctgcgcaaacgatttccgcacaagaagtagatggtattacaggcggt
tctacacaagttagagaagttgcgagtgcacttatcgacgttgctaaagctaacaatatt
ccgatacttttagttgggcacgttacaaaagatggttcaatagcagggccgcgaacgctt
gagcatttagttgacacagtatgtcaatttgagggcgacacacaaacagcactacgcatg
ctaagagccgtaaagaatcgctttggacctacagacgaagttggatgcttcgacatgagc
ggtgaaggaattgaagaagtgccggatccttccggactgtttttgtcttctacagaaaac
gataatcaaggtaaaaatgcgcaagatggcacaaacgacggaacttgcgttacttttacg
cttgaaggacacagaagcctgccaattgaaatacaagcacttgtaacgcaatcagctctg
cctactcctcgccgcgcagtttctggtgttgattctaaccgtcttgcaatgcttacagca
gttttgtatcgtcacggacgcgttaatttgcttgcaaaagatttgtacgtatctactatt
gcaggagcgttggcaaaagagccgtcttgcgacttagcaatcgtagcagctttagctagc
gctgctgccgggaaagcagtaactcctaaaacttgcgcaattggtgaaatgagcttaact
ggtcaagttcgcccagtgccaagaatagagccgcgattgcgcgaggctgcgcgaatagga
tataagcgcgcaatagtttgccatatgcggaaaaacgttaatattccaggattagaaatt
attgaagttagcacagtgcgagaagcgttgaaagcacttgggctataa
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