Gardnerella swidsinskii: K9E37_04770
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Entry
K9E37_04770 CDS
T08402
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
gsw
Gardnerella swidsinskii
Pathway
gsw02024
Quorum sensing
gsw03060
Protein export
gsw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
gsw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
K9E37_04770 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
K9E37_04770 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K9E37_04770 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gsw02044
]
K9E37_04770 (ffh)
Enzymes [BR:
gsw01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
K9E37_04770 (ffh)
Secretion system [BR:
gsw02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
K9E37_04770 (ffh)
Eukaryotic Sec-SRP protein
K9E37_04770 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
ArsA_ATPase
AAA_22
nSTAND3
AAA_31
MeaB
AAA_24
Zeta_toxin
APS_kinase
AAA_18
AAA_33
ParBc
Mod_r
Motif
Other DBs
NCBI-ProteinID:
UQA88317
LinkDB
All DBs
Position
complement(1190354..1192024)
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AA seq
556 aa
AA seq
DB search
MAAFSSLTDRLSNAFKHLRSKGKLSESDIDGTIREIRRALLDADVALEVVRSFTARIRER
ALGEEVSHALNPAQQVVKIVNDELTQVLGAGVDRQLNFAKYPPTVIMLAGLQGAGKTTLA
GKLGYWLKDAGHTPLLVAADLQRPNAVTQLQVVGERAGVPVFAPEKGVQTGGSAISLPWF
TKGDPVKVARDSINYAREKMYDTVIIDTAGRLGVDEELMKQARNIRDAVQPQEVLFVIDA
MIGQDAVRTAQAFNDGVNFTGVVLSKLDGDARGGAALSVASVTGKPILFASTGEGLKDFE
IFHPDRMASRILDMGDILTLIEHAQKQFDEEESRKAAAKIAEGSFGLDDFLEQLQQVRKL
GSMKKLLGMMPGMAAHRQELEQFDDKEIDRTEAIIRSMTPQERRNTKIIDGSRRARIAAG
SGVSVSQVNALLQRFEQAAKMMKRMSGGAGMPGMGGIPGFGGAGSKSKRKDKKGKKKVGK
SGNPMRREAEERALRERLSGESTSDDVAGSAFAKPQQPNLQNLPEGLKELMNSEDANQDN
QLPPNFGGGLAGLFGR
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatttagttcgttaacagaccgcctttccaatgcttttaagcatttgcgcagc
aaaggcaagctatcagaatccgatattgacggcacaattcgcgagattcgccgcgcactt
ctcgacgcagacgttgcgttggaagtagtccgctcattcactgctcgaattcgcgagcgc
gctcttggtgaggaagtttcgcacgctttaaacccagctcagcaagttgtgaaaattgta
aacgacgagcttacgcaagtattgggcgcaggtgtagataggcagcttaattttgcaaag
tatcctccaactgtaattatgcttgcaggtttgcaaggtgcgggtaaaactacgcttgct
ggaaagctaggctactggctgaaggatgcaggccatactcctttgcttgtagcagcagat
ttgcaacgacctaatgcagtcacgcagctgcaagttgttggcgagcgcgcaggagttcct
gtatttgctccagaaaagggcgtacaaacaggcggaagtgcgatttctttgccatggttc
actaaaggcgacccggttaaggttgcgcgcgattctattaattatgcgcgcgaaaaaatg
tatgacactgtgattattgataccgcaggtcgtttgggtgttgacgaagagctcatgaag
caggcacgcaatattcgcgatgccgtgcaaccgcaagaagtgctgtttgttattgacgca
atgattggtcaagatgctgttcgcactgctcaagcttttaacgatggcgtaaactttacc
ggcgttgtgctttctaagcttgatggcgacgctcgaggcggtgctgcactttcggttgca
agcgttactggaaaaccgattttgtttgcctctacaggtgaaggtttgaaggattttgaa
atcttccatcctgatcgaatggcttcacgcatactcgatatgggcgatattttgacgctt
attgagcacgcacagaagcagttcgacgaagaagaatcacgcaaggctgctgcaaaaata
gctgaaggcagctttggtttggatgattttttggagcagcttcagcaagttcgtaagctt
ggctcaatgaagaagcttttgggtatgatgcctggaatggctgcccaccgtcaagagctt
gagcagtttgacgataaggaaattgaccgcactgaggcgattattcgctctatgactcct
caagagcgtagaaatacaaagattattgacggatctcgccgcgcgagaattgctgccgga
tcaggtgtgagcgtttcgcaagttaatgcacttttgcaacgtttcgaacaggctgcaaaa
atgatgaagcgaatgagcggtggagctggaatgcctggcatgggcggcattcctggattc
ggtggagccggcagtaagtcgaagcgcaaagacaagaaaggcaagaagaaggtcggaaag
tccggaaatccaatgcgcagggaagctgaagagcgcgcgttgcgtgagcgtctttctggc
gaatctactagcgacgatgttgcaggttctgcttttgcaaagccacagcaaccaaatctt
cagaatcttcctgaaggacttaaggaacttatgaattccgaagacgcaaatcaagataat
caactgccacctaactttggcggcggattagctggcttattcggtcgatga
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