Gardnerella swidsinskii: K9E37_04810
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Entry
K9E37_04810 CDS
T08402
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
gsw
Gardnerella swidsinskii
Pathway
gsw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gsw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
K9E37_04810 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsw03019
]
K9E37_04810 (rnc)
03009 Ribosome biogenesis [BR:
gsw03009
]
K9E37_04810 (rnc)
03036 Chromosome and associated proteins [BR:
gsw03036
]
K9E37_04810 (rnc)
Enzymes [BR:
gsw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
K9E37_04810 (rnc)
Messenger RNA biogenesis [BR:
gsw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K9E37_04810 (rnc)
Ribosome biogenesis [BR:
gsw03009
]
Eukaryotic type
90S particles
RNase
K9E37_04810 (rnc)
Prokaryotic type
rRNA processing factors
K9E37_04810 (rnc)
Chromosome and associated proteins [BR:
gsw03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
K9E37_04810 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
UQA88325
LinkDB
All DBs
Position
complement(1199525..1200355)
Genome browser
AA seq
276 aa
AA seq
DB search
MKTQNNQQNMQNMQSKHNQNNQNNSHVQHNEDGVLRLDGGETRPGDPTQELLNALGTTIS
PDLLVEALTHRSFSHEHPGTRNYERLEFLGDAVLELVSTETLFSAHPDMTEGQLAKMRAK
AVSEWALSAVAREKLHVGAYILLGRGEMEQGGNNKDSILCDIVEALIGATFVEHGIDEAR
RVVHRLIDDTLAEVLTEGPALDWKTSLTVKAHDMGLEDPEYRMAVSGPEYAPVFEARAVL
ARKDGDEVLGVGSGSSKRKAQLAAAEIAWHALDARK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactcagaacaatcaacagaatatgcagaatatgcagagcaaacacaatcaaaat
aatcaaaacaactcgcatgtgcaacacaacgaagatggagttttgagattagatggcggt
gaaacacgtcctggagacccaacacaggaacttttaaacgctttaggcacaactatttcg
ccggatcttttggtagaagcactcacccaccgctcgttctcgcacgagcatcctggcaca
cgaaattatgagcgacttgagtttttgggcgatgctgtgcttgagttagtttccacagaa
acgctgttttctgcacatccagacatgactgaaggtcagcttgcgaagatgcgagcgaaa
gctgtgtctgaatgggcgctttctgctgttgcgcgcgaaaagctgcatgttggcgcgtat
attcttctcggtcgcggagaaatggagcagggcggaaataataaagattcaattttgtgc
gatattgttgaagcgcttattggtgcaacttttgttgaacatggaattgatgaagctcgc
agagttgtgcatcgtttgattgacgacactttggcggaagtgctaactgaaggaccagct
cttgattggaagacttcgcttacagtcaaagctcacgatatgggtttggaagatccagag
tatcgaatggctgtttctggaccagaatacgctccagtatttgaggctcgcgcggttttg
gcacgtaaggatggcgacgaagtgttgggagtcggaagtggctctagcaaacgaaaagcg
caactcgcagccgccgaaatcgcttggcacgcactcgacgcgcgtaagtaa
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