Gardnerella swidsinskii: K9E37_05455
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Entry
K9E37_05455 CDS
T08402
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gsw
Gardnerella swidsinskii
Pathway
gsw03030
DNA replication
gsw03430
Mismatch repair
gsw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K9E37_05455
03430 Mismatch repair
K9E37_05455
03440 Homologous recombination
K9E37_05455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsw03032
]
K9E37_05455
03400 DNA repair and recombination proteins [BR:
gsw03400
]
K9E37_05455
Enzymes [BR:
gsw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K9E37_05455
DNA replication proteins [BR:
gsw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K9E37_05455
DNA repair and recombination proteins [BR:
gsw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K9E37_05455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UQA88430
LinkDB
All DBs
Position
complement(1358537..1359316)
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AA seq
259 aa
AA seq
DB search
MPTHIQELLNALDLAPKQDENTLLAESWLLGFDTETTGANIGKDAIVSATLVLRNPELAH
AGDVVSTWLINPHQPMNPKASEVNGFTDEYLQEHGGEPEEELEFLAHAVSMAQAKNIPLL
AYNAPFDIAMLRHDLKRWHLTALEERATCSIHALNANDILTVDPLVIDRAVSRRSGKRTL
TITSQFYGVEPIGDFHDATADTVAALDLIAPMSKLYESVSCMRLNTMMDWQREAYINWRD
SFNQWLQSHGREPITGTWL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgccaactcatattcaagaattgttaaatgctttagatttagcacctaagcaagatgag
aatacattacttgctgaatcatggttacttggtttcgacactgaaactacaggtgcaaat
attggtaaagatgccattgtttctgcaactctagtattacgcaatcctgaactagctcac
gctggagatgtggtatcaacttggttaattaaccctcatcagcctatgaatcctaaggca
agcgaagtaaatggtttcacagacgaataccttcaagaacacggcggagagcctgaagaa
gaacttgaattccttgcgcacgcagtaagcatggctcaagctaagaatattccactactt
gcttataacgctccatttgatattgcaatgttacgtcacgacttgaagcgttggcatctt
actgcgttagaagaacgcgcaacttgttcaatacatgcactaaacgctaatgacattctt
actgttgaccctcttgttatcgatagagctgtttctagaagatctggcaagcgtactctc
actattacatctcaattttatggagttgaaccaatcggagatttccacgatgctacagca
gacacagttgcagctcttgatttgattgctccaatgagcaaactatatgagtcagtaagt
tgcatgaggctgaatactatgatggattggcagcgcgaagcttatattaattggcgagat
agcttcaatcaatggctgcaatctcacgggcgtgagcctattactggaacatggctataa
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