Gardnerella swidsinskii: K9E37_05840
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Entry
K9E37_05840 CDS
T08402
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
gsw
Gardnerella swidsinskii
Brite
KEGG Orthology (KO) [BR:
gsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsw03009
]
K9E37_05840
Ribosome biogenesis [BR:
gsw03009
]
Prokaryotic type
ribosomal protein modification factors
K9E37_05840
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
UQA88496
LinkDB
All DBs
Position
1435426..1436667
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AA seq
413 aa
AA seq
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MVNFVSPEREFTLMDSLSSIIEVFALKKWQWSVEVSALDTTCILDSCVYLDEADCADIVL
ESARGKGLGLESLTSGLYELLEHIVYSNQSVLYSCSSSLRIKGDAILNLSNSASKNTDYT
FYSMSDNAIASLPPEYCGGKSTGEFSSIDENLIRCYYTNNGWAAGASIQEATLHALNELI
ERDATSNILLSNIFDDVCVEFLIPNCELLKEIKQAIESATGNKVYIVSIPALSGSVVLSI
CYKTDREEIPTFGCGASQFLGYATYRSFLELWQELCADKDYSNPEERDRSKRLKHLVHSY
PNIKKALFLEKIRQDSGKFSQKLVSYDIRDTLSIPNIEIQINNIVNDLHKYGIDIWKRDA
FHYERKSMKCNPSVVQIVAPGLERFHVIRHGFPAELIGRLRKRKSIMSIRQHN
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggttaattttgtttcacctgaacgagaatttacattgatggattctttgtcatcaatt
attgaggtatttgccttaaagaagtggcaatggagtgttgaagtatcagcattagacact
acttgtattttggattcgtgtgtttatttagatgaggctgattgtgcagatattgtttta
gaatccgctagaggtaaaggtcttgggcttgaatctctaactagcggtttatatgaatta
ttggaacatatagtatattcgaatcagtctgttttgtattcttgttcatcatctcttcga
ataaaaggagatgcgattcttaatctttctaattcagcaagcaaaaatactgattatact
ttttatagtatgagtgataatgctattgcttcgttaccaccagaatactgcggtggaaag
tctactggtgagttttcttctattgatgaaaatttaattcgttgctactatacaaataat
ggatgggccgcaggtgcttctatccaagaagcgactttgcatgcgcttaatgaacttatt
gaacgagatgcaacatctaatattcttctttctaatatatttgatgatgtatgcgtagag
tttttaattcctaattgtgaattattgaaagaaataaaacaggctattgagagcgcaact
ggtaacaaggtgtatattgtatcgattccagctttgtctggctcagtggtgctatctata
tgttataagacagatagagaagaaattcctacttttggatgcggcgcatcgcaattttta
ggatacgcaacatatcgttcgtttcttgagttatggcaagagttatgtgcagataaagat
tattctaatcctgaagaacgtgatagatccaaaagactaaaacatcttgtacattcatat
ccaaatattaagaaagctttattcttagaaaaaattagacaggatagtgggaaattttca
caaaaattagtgtcatatgatatacgtgacactttatctattcctaacatagaaattcag
ataaataatatagtaaatgatcttcataagtacggaatagatatatggaaacgtgacgca
ttccactatgagcgtaaatcgatgaaatgcaatcctagtgttgtgcaaattgtcgcacca
ggattggaacgttttcatgttattcgtcatggttttcctgctgaacttataggtcgtcta
agaaaacgtaaatcaataatgtcgattcgtcaacacaattaa
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