Gordonia terrae: BCM27_06585
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Entry
BCM27_06585 CDS
T04440
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
gta
Gordonia terrae
Pathway
gta03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gta00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BCM27_06585
09124 Replication and repair
03420 Nucleotide excision repair
BCM27_06585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gta03021
]
BCM27_06585
03400 DNA repair and recombination proteins [BR:
gta03400
]
BCM27_06585
Enzymes [BR:
gta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BCM27_06585
Transcription machinery [BR:
gta03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BCM27_06585
DNA repair and recombination proteins [BR:
gta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BCM27_06585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
Motif
Other DBs
NCBI-ProteinID:
ANY22513
UniProt:
A0AAD0K569
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All DBs
Position
complement(1450545..1452224)
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AA seq
559 aa
AA seq
DB search
MERVTDGPLIVQSDKTLLLEVDHPDAAAARAAIAPFAELERAPEHVHTYRVTPLALWNAR
AAGHDAEQVVDALVTYSRYAVPQPLLMDVVDTMGRFGRLQLVKHPAHGLTLVSLDQAVLI
EVMRNKKVAPMLGARIDDDTVIVHPSERGRLKQVLLKVGWPAEDLAGYVDGEAHAIELAQ
DDWQLRDYQEMAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAGATTLILVTNTVAGRQW
KRELIARTSLTEEEIGEYSGERKEIRPVTIATYQVMTRKSKGEYRNLDLFDSRDWGLIIY
DEVHLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGW
IAPADCVEVRVTLTDEERLQYAVAEPEEKYKLCSTAHTKVNVVKAILDKHRGQQTLIIGA
YIDQLEELGRELDSPVIQGSTKNKEREVLFDRFRSGELQTLVVSKVANFSIDLPEASVAV
QVSGTFGSRQEEAQRLGRLLRPKRDGGQAHFYSVVSRDTLDADYAAHRQRFLAEQGYAYR
ITDADDLLGPTIGDSTSAD
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggtgaccgatggacccctgatcgtgcaatccgacaaaacgctgctgctcgag
gtggatcaccccgacgccgcggcggcacgcgcggcgatcgcacccttcgccgaactcgaa
cgtgcccccgagcacgtccacacctaccgcgtcaccccgctcgcgttgtggaacgcccga
gccgcaggtcacgatgccgaacaggtcgtcgacgcgctcgtgacgtactcgcgctacgcg
gtgccccagccgctgctgatggacgtcgtggacacgatggggcggttcggccgactgcag
ctggtgaagcatccggcacacggcctcaccctcgtcagcctcgaccaggccgtcctcatc
gaggtgatgcgcaacaagaaggtcgcgccgatgctgggcgcccgcatcgacgacgacacc
gtcatcgtgcatccgtccgagcgcggccggctcaagcaggttctgttgaaggtcggctgg
cccgccgaggacctcgccgggtacgtcgacggtgaggcgcacgccatcgagctcgcccag
gacgactggcagctgcgcgactatcaggagatggcggccgactcgttctgggccggcggc
tcgggcgtggttgtcctcccctgcggtgcgggcaagacgatggtcggcgcggccgcgatg
gccaaggccggcgcgacgactctgatcctggtgaccaacacggtcgccggacgccagtgg
aaacgcgaactcatcgcgcgcacctccctcaccgaggaggagatcggcgagtactcgggt
gagcgcaaggagatccgaccggtcacgatcgcgacctaccaggtgatgacgcggaagtcg
aagggcgagtaccgcaatctcgacctgttcgattcgcgcgactggggtctgatcatctac
gacgaggtccacctgctccccgcccccgtcttccggatgacggccgacctgcagtcgcgt
cgtcgactcggcctcaccgcgaccctggtccgcgaggacggccgcgagggggacgtcttc
agcctcatcggccccaagcggtacgacgcgccctggaaggacatcgaggcccaggggtgg
atcgccccggccgactgcgtcgaggtccgggtgaccctgaccgacgaggaacgtctgcag
tacgcggtcgccgagccggaggagaagtacaagctctgctcgaccgcgcacaccaaggtc
aacgtggtcaaggcgatcctcgacaagcaccgcggtcagcagaccctgatcatcggcgcc
tacatcgatcagctcgaggaactcggtcgcgaactcgactccccggtgatccagggttcg
acgaagaacaaggagcgcgaggtgctgttcgaccggttccgttccggcgagctgcagacc
ctcgtggtgtcgaaggtggcgaacttctccatcgacctccccgaggcctcggtcgcggtt
caggtgtcggggacgttcggttcccgccaggaggaggcgcagcgcctcggccggctgcta
cgcccgaaacgtgatggcgggcaagcacacttctactcggtggtgtcccgcgacaccctc
gacgccgactacgcggcgcaccgccagcggttcctggccgagcagggttacgcctaccgc
atcaccgacgccgacgaccttctcggcccgacgatcggtgactccacctccgcggactga
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