Gordonia terrae: BCM27_09890
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Entry
BCM27_09890 CDS
T04440
Name
(GenBank) DNA repair exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
gta
Gordonia terrae
Brite
KEGG Orthology (KO) [BR:
gta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gta03400
]
BCM27_09890
DNA repair and recombination proteins [BR:
gta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BCM27_09890
Archaeal homologous recombinant proteins
BCM27_09890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
AAA_15
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANY23066
UniProt:
A0AAD0KAF0
LinkDB
All DBs
Position
2180994..2183978
Genome browser
AA seq
994 aa
AA seq
DB search
MRLHRLRIRAFGPFADEITVDFDDLGGDGLFLLHGQTGAGKTTVLDAVAFALFGRVPGVR
DVNRRLHSDHAAADEIPEVELEATIASRRLRITRSPEHERLKKRGDGTRKVNARATLMWV
DGSGPDLTRIPEIGDAVVRLLGMSADQFFQVVLLPQGDFARFLRAHSDEREALLERLFDT
ERFGDLEEWLRERARESAARLTEQTAVLDRIAGQIVAVGGADPAAEPDFDWAQECLERAR
VVAERMLAESTAAQAAADQAQAAHESGSRLVELRRRGRAATERLARLADGEQSLAAAAHA
RRLALRAAPIVPLADDSDRVARELSAAEQSVVAARADLCRMPEGEILCAVEPDADLDERL
DAAIDRWTEESGRWEPLAQRVAQLPALVAEIDALDTALADAERRVARTRESLEAAPGRRA
EAADALQAAGDLRMQAPKLRAERDALRRVRDALTDRDEVLVRLAAADKELLDARDAHTDA
REWVLDARERRLAGMAVELAGELVDGEPCVVCGSVAHPQPATDVAGSLETATDEEEATAA
EERASAIKAIAQSAVAALGERRAHLDAVIGGADAATVDADLTRVSAELAAAERAASRLPA
LQKAVDRIDAAIDAWRTVIADTESGQSARRERVNSLRENLTELDAAVREATGGRGGVAER
RRELADLVRRARRLRDARQEAARTRDRVAEATDRLSAACAGAGFDDVTAVRAAFAPDTRI
AAWDAMLQEAASLRAAAEETLADGDVRAAMTAPEPDLDRLTADRDAARSRLDTASKEHAV
AGRQAAGLEEFVTQFWAALDALAPMRDRHAELQGLAELVSGRGQNARRMSLRSYVLAARL
DEVLVAASGRLREMSSGRYEFVHTDAAGVRGRRGGLGIEVRDEYTGALRATTTLSGGETF
FASLALALGLADVVSAESGGRVLDTIFIDEGFGTLDPEALDLVMGVLDDLRTGGRVVGVV
SHVDELRARIPAQLHVLRGEHGSSVRVQSPLGVS
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgcatcgcttgcgcatccgcgcgttcggtccgttcgccgacgagatcaccgtc
gacttcgacgacctcggcggcgacggactgttcctgttgcatggccagaccggtgcgggt
aagacgacggtgctcgacgccgtggccttcgcgttgttcgggcgggtccccggcgtgcgt
gacgtcaatcggcgactgcattcggatcacgcggcggccgacgagatcccggaggtcgaa
ctggaggcgaccatcgcgtcccgtcgtctgcggatcacgcggtcgcccgagcacgagcga
ctcaagaagcgcggggacggcacccgtaaggtgaacgcccgggcgacgctgatgtgggtg
gacgggtcaggtcccgacctgacccgtatccccgagatcggtgacgcggtggtccggctg
ctcgggatgagtgccgaccagttcttccaggtggtgctactgccccagggcgacttcgca
cggttcctgcgcgcgcactccgatgagcgggaagcgttgctggagaggctgttcgacacc
gaacgcttcggtgatctcgaggagtggctgcgcgagcgggcccgcgagagcgcggccagg
ctgaccgagcagaccgcggtgctcgaccggatcgccgggcagatcgtggcggtcggtggt
gccgacccggccgccgagcccgacttcgactgggcgcaggaatgtctcgagcgtgcccgg
gtggtcgcggagcgcatgctcgcggaatcgactgcggcacaggctgcggcggaccaggcg
caggccgcccacgagagcgggagccggctcgtggagctgcgacgccgggggcgtgcggcc
accgagcgtctggcccggctcgccgacggggagcagtcgctggcggccgccgcgcacgct
cgccggctcgcgctgcgggcggcgccgatcgtgccgctcgccgacgactccgaccgggtg
gcgcgcgaactctcggccgccgaacagtccgtggtcgctgcgcgtgccgatctgtgccgg
atgcccgagggcgagatcctgtgtgccgtcgagccggacgcggacctcgacgagcgcctg
gacgccgcgatcgaccgctggaccgaggaatcgggtcgatgggaacccctcgcccagcgg
gttgcgcagctgccggcactggtcgccgagatagatgcactcgacacggccctcgccgac
gccgagcgccgggtcgcccggacacgggagtcactcgaggccgcaccgggtcggcgtgcc
gaggccgccgacgcgctccaggcagccggagacctgcgcatgcaggccccgaagctgcgg
gccgagcgtgacgcactgcgacgggtccgcgacgccctgaccgaccgggacgaggtcctc
gtgcggctcgccgccgccgacaaggagctgctcgacgcacgcgacgcgcataccgacgcc
cgggagtgggtgctcgacgcccgggaacgccgcctcgccgggatggccgtggaactggca
ggcgagctcgtcgacggagagccgtgcgtcgtctgtggttcggttgcgcacccgcagccg
gcgacggacgtcgccggctcgctcgagacggccaccgacgaggaggaggcgaccgcagcc
gaggagcgggcgagtgcgatcaaggccatcgcgcaatccgcggtggccgcgctcggcgaa
cgccgcgcccatctcgacgccgtcatcggcggtgccgacgccgcgaccgtcgatgccgac
ctcacccgtgtaagtgccgaactcgccgcggcggagcgtgccgcgtctcgtttacccgca
ctgcagaaggccgtcgaccggatcgacgccgcgatcgatgcgtggcgcaccgtcatcgcc
gacaccgagtcgggccagtcggcgcgtcgcgagcgcgtgaactcgttgcgcgagaacctc
accgagctcgacgcggcagtccgcgaagcgaccggtgggcgcggcggggtcgccgagcgg
cgtcgtgaactcgccgacctggtccgccgcgcacgtcggttgcgcgacgcccgacaggag
gccgcgcgaacacgggatcgggtggccgaggcgaccgaccggttgtccgctgcctgcgcc
ggcgcgggattcgacgacgtcacggcggttcgggcggcgtttgccccggatacccgcatc
gccgcgtgggacgcgatgctgcaggaggcggcgagtctgcgcgccgccgcggaggagacc
ctcgccgacggcgatgtgcgggctgcgatgacggctcccgagccggacctcgaccgcctc
accgccgatcgcgatgccgcgcgcagccgcctcgacaccgcgtcgaaggaacacgccgtg
gccggtcggcaggcggcggggctcgaggagttcgtcacccagttctgggcggccctcgac
gccctggcgccgatgcgggaccgtcacgccgaactccagggactggccgagctggtcagt
gggcgaggccagaatgcgcgccggatgtccctgcggtcgtacgtgctggccgcgcgcctc
gatgaagtgctcgtcgccgcgtccggccggttacgcgagatgtcctcgggccgttacgag
ttcgtccacaccgacgccgcgggtgtccggggccggcgcggcggcctgggcatcgaggtg
cgcgacgagtacaccggtgcactccgggcgacgacgaccctgtccggcggggagacgttc
ttcgcatcgctcgctctcgcactcggtctcgccgacgtcgtatccgcagagtcgggcgga
cgcgtgctcgacaccatcttcatcgacgagggattcggcaccctcgaccccgaggcgctc
gacctcgtgatgggtgttctcgacgacctccggaccggtgggcgtgtcgtcggcgtggtg
agtcatgtcgacgaactccgggcacgaatcccggcccaactgcatgtcctgcgcggtgag
cacgggtcgtcggtgcgggtgcagagccccctcggcgtgtcgtga
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