Gordonia terrae: BCM27_11655
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Entry
BCM27_11655 CDS
T04440
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gta
Gordonia terrae
Brite
KEGG Orthology (KO) [BR:
gta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gta03016
]
BCM27_11655
Enzymes [BR:
gta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BCM27_11655
Transfer RNA biogenesis [BR:
gta03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BCM27_11655
BRITE hierarchy
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
LPG_synthase_C
Lipase_GDSL_2
Motif
Other DBs
NCBI-ProteinID:
ANY23363
UniProt:
A0AAD0K6H4
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All DBs
Position
complement(2568573..2569850)
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AA seq
425 aa
AA seq
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MNDPAPDDTAPDDPTPEVTPLLQPADGVPPVLATAAEFADAAAALAAGSGPIAIDTERAS
GYRYSQRAYLIQIKRHGSGSFLLDPIGDPDALAPVIDALRGPEWVLHAADQDLPCLRELG
FECVELYDTELAGRLLGLAKVNLAAMVAEFLGLGLLKGHGAADWSRRPLPDEWLNYAALD
VEVLVELRDAMDAALAAAGKDGWAREEFAYILSRPPAPPRTDRWRKTSNIHTVKSTRALA
AVRELWTAREELAQRRDVAPGRVLPDTAIVNAATVNPESIAELTKLPVFGGPRQRRQAGI
WLSALQRAREIPDSKLPSRKTTGPGLPPVSRWDQRNPEAAARLQTVRPALKEIAETHTLP
MENLLAPDVVRQLCWDGLPEPITAAALDAHLAAAGARVWQRTLCAEPLTQALLEAARPGP
TAAGE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgatcccgcgcccgacgacacggctcccgacgaccccacaccggaggtcacccca
ctgctccagccggccgacggcgtacccccggtcctcgcgacggccgccgaattcgcggac
gccgcagcagctctcgcggcgggcagcggaccgatcgccatcgacaccgaacgcgcatcg
ggctaccgctactcacaacgggcctatctgatccagatcaaacgacacgggtcgggcagc
ttcctgctggaccccatcggcgatccggacgcactggcaccggtgatcgacgctctgcgc
ggaccggagtgggtgctgcacgccgccgaccaggacctcccgtgcctgcgtgaactcggt
ttcgagtgcgtcgagctgtacgacaccgaactggccggacgcctcctgggcctggccaag
gtcaacctggcggcgatggtggccgagttcctcgggctcgggcttctcaagggtcatggt
gcggccgactggtcgcgtcgtcccctgcccgacgagtggctcaactatgccgcactcgac
gtcgaggtcctcgtcgaactgcgtgatgcgatggacgccgcgctcgccgcggccggcaaa
gacggttgggcgcgcgaggaattcgcatacatcctctcccggccgcccgccccgccgcgc
accgacaggtggcgcaagacctcgaacatccacaccgtcaagtcgacccgcgcactggct
gctgtgcgcgaattgtggaccgcgcgtgaggaattggcgcagcgccgggatgtcgcaccc
ggccgcgtcctgcccgacaccgcgatcgtcaacgccgcgaccgtgaaccccgagtccatc
gccgaactcaccaagttgccggtcttcggcggtccgcggcaacgacgccaggccgggatc
tggctgtcggcgctgcaacgggcccgcgagatccccgacagcaagctcccgtcgcgcaag
acgaccgggccgggcctgccaccggtcagtcgctgggatcagcgcaacccggaggccgcg
gcacgactgcagacggtgcgtccggcgctgaaagagatcgccgaaacccacaccctgccg
atggagaaccttctcgctcccgatgtggtgcggcaactgtgctgggacgggctgcccgag
ccgatcacggccgcggcgctcgatgcgcacctggccgctgcgggcgcccgcgtctggcag
cggacactgtgtgccgagcccctgacgcaggccctcctcgaggctgctcgaccagggccg
acagcagcgggcgagtag
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