Gordonia terrae: BCM27_13925
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Entry
BCM27_13925 CDS
T04440
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
gta
Gordonia terrae
Pathway
gta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BCM27_13925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gta03400
]
BCM27_13925
Enzymes [BR:
gta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BCM27_13925
DNA repair and recombination proteins [BR:
gta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BCM27_13925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
PhoH
RecD_N
AAA_22
SH3_13
UvrD-helicase
Helicase_RecD
TraI_hel_assoc_N
Mg_chelatase
Herpes_Helicase
SRP54
Motif
Other DBs
NCBI-ProteinID:
ANY23743
UniProt:
A0AAD0K7D2
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All DBs
Position
complement(3079704..3081593)
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AA seq
629 aa
AA seq
DB search
MSISDVQVTEWATGVLAEWNEAGVLAAADVHITDRLVAMCAEPVSETARLGAALAVRAVR
LGSTCLALDRLDELAGETIPDLTVPSSEAVLDALLESPLVAGSEAGPLRPLVVRRSVDGP
LVYLQKYFRQEQTIRDTLARRAQTSPVVDAGALRAAIAAVYTSPEDGYLQKLAAAVAATR
WTTVLAGGPGTGKTYTVARILAVLDALQGPGLRIGLCAPTGRAAAQLQASVEAESTVPVT
AHAVTLHSLLGWRPGANPRYGRGRTLPHDVIVVDETSMLSMTAMSRLLDAVRPDARVLFV
GDPHQLASVEAGAVLADLVERTDAAGAQKDSETAMAVSRTALEAVLADADDEPDPADRDQ
LADGVITLRRQFRFGGGISRVAAAVNSGDADEVLRLVAAKDVPNVELVAPDELDDVRADL
VEWGRTLRVAARRADAAAALDALDAHRVLCAHREGSSGVRGWSARITEWLGTTGAEVAGW
YPGQPILVTANDRQTSTFNGDTGVVIADPEGRMSGVDAVRVAFRRGGTARLLHPTQLADV
VSVHAMTIHRSQGSQFRQVTVILPPTGSELLTRELLYTAITRAREHVRIVGTPEVLAAAV
DRRVQRASGLRSTVTPFDDRDDRVRRRPR
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagcatttccgatgtccaggtgacggaatgggccaccggtgtgctcgccgagtggaac
gaggccggggtgctggcggccgcggacgtgcacatcaccgatcgtctcgtcgccatgtgc
gccgagccggtgtccgagaccgcgcgactcggcgccgcgctcgccgtacgtgccgtgcgc
ctgggttcgacgtgcctggcgctggatcggctggatgagctcgccggcgagaccatcccg
gatctcacggtcccgtcgtcggaagcggtcctcgacgccctgctcgagagcccgctggtg
gccggcagcgaggcgggtccgttgcgtccgttggtcgtacggcgctccgtcgacggcccc
ctggtctacctccagaagtacttccggcaggagcagacgatccgggacaccctggcccgg
cgtgcgcagacctcgcccgtggtcgacgcgggcgcgctgcgcgccgcgatcgccgcggtg
tacacctcgcccgaggacgggtacctgcagaagctcgccgccgcggttgccgcgacccgc
tggaccaccgtcctggcgggcggcccgggcacgggcaagacctacaccgtcgcacgcatt
ctcgccgtcctggacgcgctgcaggggcccggcctgcggatcgggttgtgtgcgcccacc
ggccgcgcggcggctcagctgcaggcctcggtggaggcggagtcgacggtcccggtcacg
gcacacgccgtcacgttgcattcgctgctcggatggcgcccgggcgccaacccgagatac
ggccgcgggcgtacgctcccacacgacgtgatcgtcgtcgacgagacctcgatgctgtcg
atgacggcgatgagccgcctgctcgacgcggtccgacccgacgcgcgggtgctcttcgtc
ggtgacccgcatcagctcgcctcggtggaggcgggggcggtgctcgccgatctcgtcgaa
cgaaccgatgcggccggggcgcagaaggattcggaaaccgccatggcggtgtcgcggacc
gcgctcgaggcggtgctcgcggatgccgacgacgaaccggacccggcggacagggatcag
ctcgccgacggcgtcatcaccctgcgtcggcagttccgtttcggcggcggtatctcacga
gtggccgccgccgtgaattccggtgacgccgacgaggtcctgcggctcgtggcggcaaag
gacgtcccgaatgtcgagctcgtggctcccgacgaactcgacgatgtacgcgccgatctc
gtcgagtgggggaggacgctgcgtgtcgccgcccgccgtgccgatgccgcagctgcgctc
gatgcactggacgcccaccgcgtgctgtgcgcgcatcgggagggatcgtccggagtccga
gggtggtcggccaggatcaccgagtggctcggtaccacgggtgccgaagtcgccggatgg
tatccgggacagccgatcctggtcaccgccaacgaccggcagacctcgaccttcaacggc
gacacgggagtcgtgatcgccgaccccgagggacggatgtccggagtcgacgccgtccgg
gtcgccttccggcgtggcgggacggcgcgactgttgcatccgacgcagcttgccgacgtc
gtatcggtccacgcgatgaccatccaccgcagtcaggggagtcagttccgacaggtgacg
gtgatcctcccgcccacgggttcggagctgctcacccgcgagttgctgtacaccgcgatc
acccgtgcccgcgaacacgtgcggatcgtcggcacgccggaggtgctcgccgcagcggtc
gaccgtcgcgtgcagcgagccagtggtctgcgatcgacggtcacgccgttcgacgaccgg
gatgatcgggttcgtcgacgtcctagatga
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