Gordonia terrae: BCM27_13935
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Entry
BCM27_13935 CDS
T04440
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
gta
Gordonia terrae
Pathway
gta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BCM27_13935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gta03400
]
BCM27_13935
Enzymes [BR:
gta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BCM27_13935
DNA repair and recombination proteins [BR:
gta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BCM27_13935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ANY23745
UniProt:
A0AAD0K821
LinkDB
All DBs
Position
complement(3084967..3088446)
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AA seq
1159 aa
AA seq
DB search
MLILHRAERTDTLADALAEVLARPLGDPMRPDIVSVPAAGVERWLAQHLARRLGTGTGED
GIAANIDFTGPSRLADAIGAAVLGDTRLHTAASLTAPDDPWRAAELTWPVLRVLDDRIDD
PALDVIARHIGAGDASSPRIGRRYATARHLAELFDRYGRSRPSLIADWAAGHDLDGAGRP
LRDDLAWQPAFWRAVRDEIGRPHPAENLPAVCDRLRTDPEAGGLPERLSVFGPTRITESF
RRIAAAAAVHHDVHLFVPHPSPRLWEELGALVDADAGEGVPPRRGERELPELRNPLLAGL
SRDLQELQLRLAPIVDRDLHHAPRQPVVADTALHAVQSGIRDDLAPAADLTAASASSNIP
DTADPSVEVHACHGPERQIEVLRDRLLHLFAADPELQPRDVLVMCPDVETFAPLIRGAFG
QAGLPHPAFDLRVRLADRGIRHVNPILDVIVGVVELAAGRVTAGEVVDLLGAPPVRTRFA
MTDDDLDLIREWLAHSNVRWGLGVAERARYGLERFRQGTFDAGLDRIALGVVAEEADDEW
LGTALPLAGVESTGIDLVGRFDEFLDRLGRVLAELREAAPAHRWAETLIDAVSSLTATEP
ADDWQRAQAIRMLSEAFGDTRPVEPEEVLRLADVRDLLAALVAGRPTRSNFRTGELTVCT
MVPMRSVPHRVIVLLGVDAEVFPRVQRIDGDDVLGVDPLVGERNPRDEDRQCFLDAICAA
QDSLLVFYSGADPVSGRRIPPAVVVSELVDTLTGLTGADPVRRHSLHGFDARNFTPGGVR
GISGPFSHDSSMLAGAEALREPPRRPVVAAREVLPAPERTLDTDDIDLATLIDFHVDPIV
AFIRQRLGARIPDDDRPHDDQLDVELEPLDKWGIGDRFLSRMLTGVPISDCEAAELRRGT
LPPFAFGTRELRAISRAVTRLHGVVEPLRSGTPRTLDILVRLPDGRRVHGTVGEVFGDSG
PAAVVRATYSKLKAKQQLSGWITLLAVAAAATQGNDAAGSVESAVLVGRAARGGGTSTVR
FRRPEDPVPLLYDLVRLRDEGLRRPLPLPLEPACTFVENDGPGRRSTFSLANARRNFEDR
FGPARDPHVRLTFGGDVLADVEFDDLLACPTPEDRTVGGVDSGPRTLGGVELPMADGEPL
FAGLARTVWVPLNQHREGT
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcctgcaccgcgccgaacgcaccgacaccctggccgatgcgctggccgaggtg
ctggcgcgtccgctcggcgatcccatgcggcccgacatcgtctcggttcccgctgccggg
gtcgagcgatggctcgcccagcatctggcgcgacggctgggaaccgggaccggcgaggac
ggtatcgccgcgaacatcgacttcaccgggccgtcccggcttgcggatgcgatcggcgcc
gcggtgctcggcgatacccgtctgcacaccgccgcctcgctcaccgcgccggacgacccg
tggcgcgcggccgagctgacatggccggtcctgcgggtcctcgacgaccgcatcgacgat
cccgctctcgacgtcatcgcgcggcacatcggtgccggcgacgcctcctcgccccggatc
ggacgccgctacgccaccgcacggcatctggccgagctgttcgaccgctacgggcggtcg
cgaccgtccctgatcgccgactgggccgccggtcacgacctcgacggcgccggtcgaccc
ctgcgggacgatctcgcctggcaacccgcattctggcgcgcggtccgcgacgagatcggc
cgcccgcatcccgcggagaatctccccgccgtctgcgatcgcctgcgcaccgaccccgaa
gccgggggactgccggaacggttgtcggtgttcgggcccacccggatcaccgagtcgttc
cgtcggatcgccgccgccgcggccgtccaccacgatgtccacctgttcgtgccgcacccg
agtccccggttgtgggaggaactcggcgccctcgtcgatgccgatgccggcgagggggtc
ccgccgcggcgcggggagcgcgagctccccgaactacgaaacccgttgctggccggcctc
tcccgggatctccaggaactccagctgcgtctggccccgatcgtggaccgggatctgcac
catgccccgcggcagccggttgtggcggatacggcactgcacgccgtgcagtcggggatc
cgcgacgacctggcccccgcggctgacctcaccgccgcctcggcgagctcgaacatcccg
gataccgcggacccgtcggtcgaggtgcatgcctgtcacggacccgagcgccagatcgag
gtgttgcgggaccgattgctgcatctgttcgcggccgatccggagctgcagccgcgggac
gtcctcgtcatgtgcccggatgtcgagacattcgcgccgctgatccgtggcgcgttcggc
caggcaggtctgccgcaccccgccttcgatctacgggttcgcctggccgaccgcggaatc
cgtcacgtcaacccgatcctcgacgtcatcgtcggggtcgtggagctggccgcgggtcgc
gtgaccgccggcgaagtcgtcgacctcctcggcgccccgccggtacgcacccggttcgcg
atgaccgacgacgacctcgacctgatccgggaatggttggcgcacagcaacgtccgctgg
ggcctgggtgtcgccgaacgggcccggtacggcctcgaacgattccggcagggaaccttc
gatgccggtctggatcggatcgccctcggtgtcgtcgccgaggaggccgacgacgagtgg
ctcggcaccgcactgccgctggccggcgtcgagagcaccgggatcgacctcgtcggccgg
ttcgacgagttcctcgaccgcttgggtcgggtgctggccgaactgcgggaagcagctccc
gcgcaccgctgggccgagacgctcatcgacgccgtgtcgtcgctcacggcgaccgagccc
gccgacgattggcaacgcgcccaggccatccggatgctgagcgaggccttcggagacacc
cggccggtcgaaccggaggaggtgctgcggctggcggacgtgcgagacctgttggcggca
ctggtcgccggcagaccgacccgctcgaacttccgcaccggagaactcaccgtctgcacg
atggtgcccatgcgctcggtgccgcaccgcgtgatcgtgctgctcggggtggacgcggag
gtcttcccacgcgtccaacggatcgacggcgacgacgtcctcggggtggatccgctggtg
ggcgaacgtaatccgcgggacgaggaccggcagtgtttcctcgacgcgatctgcgccgcg
caggactcacttctcgtcttctacagcggtgccgacccggtctccggccggcggatcccg
cccgccgtcgtcgtcagcgagctcgtcgacacactgaccggcctgaccggcgccgacccg
gtccgtcgacactctctgcatggattcgacgcgcggaacttcactcccggtggcgtccgg
gggatctcgggacccttcagccacgattcgtcgatgctcgccggcgccgaggcgctgcgc
gagccgccgcgacgcccggtggtggccgcgcgcgaggtcctcccggcgccggaacgcacc
ctcgacaccgacgacatcgacctcgccaccctcatcgacttccatgtcgatccgatcgtc
gccttcatccggcaacggctcggtgcccgcattcccgacgacgaccggccgcacgacgat
cagctcgacgtcgaactcgaaccgctggacaagtgggggatcggcgaccggttcctctcc
cggatgctgaccggggtgcccatctcggactgcgaggccgccgagctccggcgcggcacc
ctgcccccgttcgccttcggcacccgcgagctccgcgccatctcccgggcggtgacacgc
ctgcacggtgtcgtcgagccgttgcggtcggggactccccggaccctggacatcctggtc
cgtctgcccgacgggcggcgggtgcacgggacggtcggcgaggtgttcggcgactccggg
ccggcggcggtggtgcgggcgacctattccaagctcaaggccaaacagcaactcagcggg
tggatcacgctgctcgcggtcgccgccgcggcgacccagggcaacgacgcggccgggtct
gtcgagtcggcggtcctggtcgggcgtgccgcccgcggcggcgggaccagcaccgtgcga
ttccggcgccccgaggacccggtcccgcttttgtacgacctcgtccgactccgcgacgag
ggtctgcgtcgtccgctgccgttgcccctcgaacccgcgtgcaccttcgtcgagaacgac
ggtcccgggcggcgcagtacgttctcgctggccaacgcgcgcaggaacttcgaggacaga
ttcggtcccgcgcgcgacccccatgtgcggttgacattcggcggagacgtgctggccgac
gtcgaattcgacgacctcctcgcctgcccgacacccgaggaccggacggtcggcggtgtt
gattccgggcctcgcacgctcggcggggtcgaactgccgatggccgacggcgaaccgctg
ttcgccggcctcgcgcgcactgtgtgggtgccgctcaaccagcatcgggagggcacatga
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