Gordonia terrae: BCM27_18360
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Entry
BCM27_18360 CDS
T04440
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
gta
Gordonia terrae
Brite
KEGG Orthology (KO) [BR:
gta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gta03000
]
BCM27_18360
Transcription factors [BR:
gta03000
]
Prokaryotic type
Helix-turn-helix
Other families
BCM27_18360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
HTH_50
HTH_23
HTH_22
HTH_7
HTH_29
ABC_tran
AAA_16
HTH_28
HTH_11
HTH_17
Motif
Other DBs
NCBI-ProteinID:
ANY24499
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Position
4084498..4086303
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AA seq
601 aa
AA seq
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MSTAVKHQPTAQARRSTTFVARARERFLSDDEVPDDRIDGTVRDAISTSWRRSRSFKVQA
DRLELPFVREPNTDSPLMSAARPVLDQLAVDLSDEPVSIILTSPDGVVLSRAAGSGELLT
QLDAVSLAPGYSYSEEHAGTNGIGTALESRQATLVTGPEHYAGALAQLSCAGVPIRNPFS
GGIVGALDLTGWVEEGGSLLLSLAKSATVQIEQQMLANASERESRLLAAYLATCRRAPQM
MVLALAADVVLMNRRLRQSIDPQDQVSMLEHAVDQALDAGAVRRVNTLPSGRTVRLAPVA
EFSDTDAGIAVFHVHLMDPGSFSEPRRRPAATATLPGIVGRSSSWRECCDRIAQHVGAGR
WIAVSGERGSGRAAVLRAAAGQYRRGTIRVFSAEDFSDADTLDSFSAEIERDDFAIILRD
IDEFDDDMLFDVADVLQGREHAGWLGITLSTVDTLPALGATLLPFFSHTVEVPPLRHRIE
DLQVLVPAILRQLTRGKELPVAPDAMRQLSKYTWPGNVAELRQALRDVVTHHRSGTITVK
QLPPTYRAQSRHTLTRIEALERDAIVRSLEENGHNKLAAAHALGISRATIYRKIKEFGID
V
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
ttgtctaccgcggtgaagcaccagcccacagcccaggctcgcagatcgaccaccttcgtc
gcacgtgcgcgcgagcgtttcctcagcgacgacgaagtccctgacgaccgcatcgacggc
accgtccgcgatgccatctccacctcatggcggcgctcgcgctccttcaaggtgcaggca
gaccgcctcgagttgccgttcgtccgggaaccgaacaccgacagcccactcatgagcgcc
gcccgcccggtgctcgatcagctggccgttgatctgtcggacgaaccggtgagcatcatc
ctcacctcgccggacggtgtcgtgctgtcgcgcgcggccggcagcggtgaactcctcacc
caactcgacgccgtatccctcgcgcccggttacagctacagcgaagaacacgccggtacc
aacggaatcggcaccgcactggagtcgaggcaggcaaccctcgtcaccggacccgagcac
tacgcgggcgctctcgcccagttgagctgtgccggcgtcccgatccggaatccgttctcc
ggcggcatcgtcggcgcgctcgatctcaccggctgggtggaggagggcggttcgctgctg
ctgtcgctggccaagtcggccaccgtccagatcgagcaacagatgctggcgaacgccagt
gagcgcgaatcacgccttctcgcagcctatctcgccacctgccgacgagcgccccagatg
atggtcctcgcgctcgccgccgacgtcgtgctgatgaaccgccggctccgccagagcatc
gatccgcaggaccaggtgtcgatgctcgagcacgcggtggaccaggccctcgacgccggt
gccgtccggcgagtcaacacgctgcccagcggccgcacggtccggctggcgccggtcgcc
gaattctccgacaccgatgccgggatcgcggtctttcacgtgcatttgatggaccccggg
tcgttctccgaaccacgccgtcgaccggccgcgaccgcaacgctgccggggatcgtcggc
cgcagttcgtcgtggcgggaatgctgcgaccgaatcgcgcagcacgtcggggcggggcgc
tggatcgcggtgtcgggcgagcgcggaagtggccgggccgcggtgctgcgcgcagccgcg
ggccagtaccgccgcggcaccatccgggtcttctccgccgaggatttctccgacgccgac
accctcgacagtttcagcgccgagatcgagcgcgacgacttcgccatcatcctgcgggac
atcgacgagttcgacgacgacatgctcttcgacgtcgccgacgtgctgcaggggcgcgaa
cacgcgggatggctgggcatcacgctcagcaccgtcgacacgctgcccgccctcggcgcg
acgctgctgccgttcttctcccacaccgtggaggtcccgccactccggcatcgcatcgag
gatctgcaggtccttgtgcccgccatccttcggcaactcacccgggggaaggaactcccg
gtcgcgccggacgcgatgcgccaactcagcaagtacacctggcccggcaacgtcgccgaa
ctgcgacaggcactgcgcgacgtggtcacccatcaccggtccgggacgatcaccgtcaag
cagctccccccgacctatcgggcacagagccggcacaccctcacccgcatcgaagcgctc
gaacgcgacgccatcgtgcgcagcctggaggaaaacggccacaacaaactggccgccgcc
cacgcgctgggcatctcccgcgcgacgatctaccgcaagatcaaggagttcggcatcgac
gtctga
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